| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is bcsP31 [H]
Identifier: 218708395
GI number: 218708395
Start: 357878
End: 358846
Strand: Reverse
Name: bcsP31 [H]
Synonym: VS_0355
Alternate gene names: 218708395
Gene position: 358846-357878 (Counterclockwise)
Preceding gene: 218708397
Following gene: 218708394
Centisome position: 10.88
GC content: 44.99
Gene sequence:
>969_bases ATGGCATTTACCAAACTGATTAAAGTTGGGGCTATTGCAGCTGCTGTAATGGGCGCTGGCGCAGTTAACGCTCAAGAGTT CATCACAATTGGTACTGGTTCAGTAACGGGTGTTTATTACCCGACTGGTGGTGCAATTTGTAAGCTAGTGAACAAAGGCC GTAAAGACCACAACATTCGTTGTTCTGTCGAGTCTACTGGCGGTTCAATCTACAACGTTAATACCATCCGTGCTGGTGAA CTAGATTTCGGTGTTGTTCAATCGGACTGGCAATACCACGGCTACAACGGTACAAGTAAGTTCAAAGACCAAGGCGAATA CAAGAAACTTCGTGCTATGTTCTCTCTACATACAGAACCGTTCAACATCATCGCTCGCACCGATGCAGGTATTAACAATG TTTCAGACCTAGCTGGTAAGCGTGTCAACATTGGTAACCCTGGTTCTGGCGACCGTGCAACGATGGGTGTTGTAATGGAC TCTATGGGCTGGACTAACGATAGCTTCAAGCTTGCTTCTGAACTGAAAGGTTCTGAGCGTTCACAAGCACTTTGTGATAA CAAGATTGATGCATTCATCTACATGGTTGGTCACCCGAACGGATCAATTAAAGAAGCGACAACGTCTTGTGATGCAAAAC TGGTTTCTGCAACAGGTCCACAGATCGACAAGATCGTAGCTGAAAACCCATACTACGCATACAGCACAGTACCTGCTGGT ATGTACCGCGGTACAGATGCTGACGTAAATAGCTTCGGTGTTGCTGCAACTATGGTAACAACTTCAGACGTTTCGGATGA AGTAGCATACAACGTTGCTAAAGCAGTATTTGAAAACTTCGCAACATTCAAACGTCTGCACCCAGCATTTGCTAACCTGA AAAAAGAAGACATGGTTAAAGCGGGTATCTCTATCCCTCTTCACCCAGGTGCCGCAAAATACTACAAAGAAGTAGGTCTT CTAAAGTAA
Upstream 100 bases:
>100_bases TTCATCACATGGATTGAAAAAGGTGCCGTTTCCAAATAGGAAACTCCAGAAACGACTACACTTGTTTCAGGGTTAATAAT GAATAAAGGAAGGGAAATTC
Downstream 100 bases:
>100_bases CTCTACTTTAAGCCTACTAAACCAATAAGGAGGCCAGTCCTCCTTATTGGCTTTTCACGTTTTATAAAAATAATTTAAGT GAAAAGAACAACCCTTTAAG
Product: immunogenic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MAFTKLIKVGAIAAAVMGAGAVNAQEFITIGTGSVTGVYYPTGGAICKLVNKGRKDHNIRCSVESTGGSIYNVNTIRAGE LDFGVVQSDWQYHGYNGTSKFKDQGEYKKLRAMFSLHTEPFNIIARTDAGINNVSDLAGKRVNIGNPGSGDRATMGVVMD SMGWTNDSFKLASELKGSERSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVSATGPQIDKIVAENPYYAYSTVPAG MYRGTDADVNSFGVAATMVTTSDVSDEVAYNVAKAVFENFATFKRLHPAFANLKKEDMVKAGISIPLHPGAAKYYKEVGL LK
Sequences:
>Translated_322_residues MAFTKLIKVGAIAAAVMGAGAVNAQEFITIGTGSVTGVYYPTGGAICKLVNKGRKDHNIRCSVESTGGSIYNVNTIRAGE LDFGVVQSDWQYHGYNGTSKFKDQGEYKKLRAMFSLHTEPFNIIARTDAGINNVSDLAGKRVNIGNPGSGDRATMGVVMD SMGWTNDSFKLASELKGSERSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVSATGPQIDKIVAENPYYAYSTVPAG MYRGTDADVNSFGVAATMVTTSDVSDEVAYNVAKAVFENFATFKRLHPAFANLKKEDMVKAGISIPLHPGAAKYYKEVGL LK >Mature_321_residues AFTKLIKVGAIAAAVMGAGAVNAQEFITIGTGSVTGVYYPTGGAICKLVNKGRKDHNIRCSVESTGGSIYNVNTIRAGEL DFGVVQSDWQYHGYNGTSKFKDQGEYKKLRAMFSLHTEPFNIIARTDAGINNVSDLAGKRVNIGNPGSGDRATMGVVMDS MGWTNDSFKLASELKGSERSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVSATGPQIDKIVAENPYYAYSTVPAGM YRGTDADVNSFGVAATMVTTSDVSDEVAYNVAKAVFENFATFKRLHPAFANLKKEDMVKAGISIPLHPGAAKYYKEVGLL K
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 34436; Mature: 34305
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFTKLIKVGAIAAAVMGAGAVNAQEFITIGTGSVTGVYYPTGGAICKLVNKGRKDHNIR CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHCCCCCCCEE CSVESTGGSIYNVNTIRAGELDFGVVQSDWQYHGYNGTSKFKDQGEYKKLRAMFSLHTEP EEEECCCCEEEEEEEEEECCCCEEEEECCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCC FNIIARTDAGINNVSDLAGKRVNIGNPGSGDRATMGVVMDSMGWTNDSFKLASELKGSER EEEEEECCCCCCCHHHHCCCEEECCCCCCCCCEEHHEEECCCCCCCCHHHHHHHHCCCCH SQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVSATGPQIDKIVAENPYYAYSTVPAG HHHHHCCCCEEEEEEEECCCCCCHHHHCCCCEEEEECCCCCHHHHEECCCEEEEECCCCC MYRGTDADVNSFGVAATMVTTSDVSDEVAYNVAKAVFENFATFKRLHPAFANLKKEDMVK CCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AGISIPLHPGAAKYYKEVGLLK HCCCEECCCCHHHHHHHHCCCC >Mature Secondary Structure AFTKLIKVGAIAAAVMGAGAVNAQEFITIGTGSVTGVYYPTGGAICKLVNKGRKDHNIR CHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHCCCCCCCEE CSVESTGGSIYNVNTIRAGELDFGVVQSDWQYHGYNGTSKFKDQGEYKKLRAMFSLHTEP EEEECCCCEEEEEEEEEECCCCEEEEECCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCC FNIIARTDAGINNVSDLAGKRVNIGNPGSGDRATMGVVMDSMGWTNDSFKLASELKGSER EEEEEECCCCCCCHHHHCCCEEECCCCCCCCCEEHHEEECCCCCCCCHHHHHHHHCCCCH SQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVSATGPQIDKIVAENPYYAYSTVPAG HHHHHCCCCEEEEEEEECCCCCCHHHHCCCCEEEEECCCCCHHHHEECCCEEEEECCCCC MYRGTDADVNSFGVAATMVTTSDVSDEVAYNVAKAVFENFATFKRLHPAFANLKKEDMVK CCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AGISIPLHPGAAKYYKEVGLLK HCCCEECCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]