Definition | Escherichia coli UMN026 chromosome, complete genome. |
---|---|
Accession | NC_011751 |
Length | 5,202,090 |
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The map label for this gene is wcaA [C]
Identifier: 218703517
GI number: 218703517
Start: 297567
End: 300110
Strand: Reverse
Name: wcaA [C]
Synonym: ECUMN_0265
Alternate gene names: 218703517
Gene position: 300110-297567 (Counterclockwise)
Preceding gene: 218703518
Following gene: 218703508
Centisome position: 5.77
GC content: 54.52
Gene sequence:
>2544_bases GTGGGAGAGGGTCGGGGTGAGGGCATCAGCACGCACATTCATCACATTCACCCATTAACTCACCCAAACACCATGCCAAC ACCAACCATTATCAAAACACTCGCCACCCAGCGCGAAAAACCGTTCATCAGCGTCGTCACGCCAACCTGGAACCGCAGCG CATTCCTGCCGTACCTGCTTTATATGTACCGCTATCAGGACTACCCGGCAGACCGCCGCGAACTCATCATCCTCGACGAT TCCCCGCAAAGCCATCAACACATCATCGACCGCCTGACCAATGGCACGCCGGAAGCCTTTAACATCCGCTATATTCATCA CCCGGAAAAACTGCCGCTGGGCAAAAAACGCAATATGCTCAACGAACTGGCGCGCGGCGAATACATCCTCTGCATGGACG ATGACGACTACTACCCGGCAGATAAAATCTCCTGGACCATCGCCAAGATGCAAAAACACCGGGCGCTCATCTCCGGCTCC GACCAGATCCCCATCTGGTACAGCCACATCAATCGCATCTTTCAAAGCCGCAGCTTTGGCCCACATAACATCCTCAACGG CACCTTTTGCTATCACCGTAACTACCTGAAAAAGCACCGTTACGACGATGATTGCAATTTAGGCGAAGAGAAAAGTTTCA CCGACAATTTCAGCGTTAACCCGCTACAACTGCCCGGCGAGCGCACGATTCTGTGTATCTCGCACAGCCACAACACCTTT GATAAAGACTTTATTCTCGGGGCCAGCACGCCTGTAAACGCGGCGCTTACAGATATCGTCAGCGATCCGCTGCTGCGCAA TGCTTATCTGAGTCTACATAACGCCACTCATCACCAAGGGATCAACCATCAGACGATCGATCAGGTAGTTGTTGTGAATC TGGATAAACGCCCGGATCGCTTACAACAGATCCGTGAAGAACTGGCATTGCTGCATATTCCACCTGAGAAGATCACCCGC CTTGCCGCCAGTGAAGATCAAAACGGCCAACGGGGACGACGTCAGTCGCACTTGCAGGCGCTGCGCCTGGCGCAACAGCA CGGCTGGCAAAACTATCTGCTGCTGGAAGATGACGCGGTTATTCTCAAGCAGGAGAAACATATTCAGGTGCTGAACACGC TGCTGGCGAGCCTGGCGAAAATTCCCTGGCAGGTGATGATCCTCGGCGGCGAAATTTCGCAGGGAACGATGCTAAAAAGT TTGCCGGGGCTGGTGCACGCGCGGGACTGCCGCAAGGTATGCGCTTATCTGGTGAACCGCCGCTACTACCCGCAACTGGC GCAGCAGATGAGCAACGATGAGCATTCGCTGGAAGACGGCTGGCAGCCGCTGCTACGCGCCGACAAATGGCTGGCCTGTT ACCCGAGCCTTAGTTATCAGCGACCAGGCTTTAGCGATATCGAGAAAAAAATGACTGATAATATTGCTCACTATTTCAAT AAGTTACCTGCTATCACAAAGCCATCCGCGTTACCCATCGCCGACACCATCGGCTTTTTTATGGAAACTTCTTTCCATTA CGCGCTCTACCGCCCAATCATCACCGCCCTACAGGCGCAGGGGCAAGGCTGCACGCTGGTGATCAACGACCGCGTGTTTA AACCGTTTCTGGATGAAATGCTGGAGACGCTAAAAAGCATCGACGATCCGCAGCTCAAAGGAATGCGCTTATCTGAAATG CAGGCACACGGTCAGCGGGTGAAATGCCTGGTCAGCCCCTACCACACGCCCGCGCTCAATGGCCTGGCAGCGGTGAACGT TCGCGCCATGTATGGCTTAGCCAAAGAGACGTGGAACCACGCCGACTGGAACCGTTTTTATCAACGCATTTTGTGTTACA GCCACTACAGCCAGCGGGCGCTGGCGCATTTCGGCAATGCAAAAGCAGTCGGCAACCCGCGCTTCGACGCCTGGCATAAC GGCACGTTTGACCGCATTCTGCCAGAAAATATTCAACCCGATTCCCGTAAACCTACGGTGCTCTACGCCCCCACGTTTGG CGCATTAAGCTCCCTGCCCCACTGGGCAGAAAAATTGGGGCGCTTAAGTGGCAATGTGAATCTGATTTGCAAACTGCACC ACGGCACCTGCTCGCGCCCGGAAGAAGCTGCATCGCTGGCCCTGGCGCGCAGGCACTTAAAACAGCGCACCGACTCCGTC CACCACACGCTGGCGCTACTGGCAAAGGCCGATTACGTGCTGACCGATAACAGCGGCTTTATTTTCGATGCTATCCACGT TGATAAGCGGGTAATCCTGCTCGACTTTCCGGAAATGGCAGCGTTGCTCGACGGTGAGAAAAGTTACTCCACGCCCGAAA GCGCCGACCAGCAAATCCGCGAAATATTGCCGGTGGCTCATGATGTTGCGGAACTGCGTTATTTGTTGTCAGAGGCGTTT GACTGGGGTGCGTTGCTGGCGCGGCTTAAGGAGATTCGTCATCACTATTGCGATGCGTTTATGGATGGCAAGGCGGGAGA ACGGGCGGCGATGGTGATTGTGGAGGCGCTGGCGGGCAAGGAATCGTCAGGGATATGTCGATAA
Upstream 100 bases:
>100_bases CTGTGCGCGCTTTTCCCCTCCCCCTACCCCTCTCCCCAAAGGGGCGAGGGAACCGATCGAGCACGGTGTTAAAATCAGCG CTGGTTTTCTCCCTCTCCCT
Downstream 100 bases:
>100_bases AATGCGATTTTTAAACATGTCGTTGGAATACGTTTATGCCATCGACATGTTTTGGGGATATGTCGAAAAAACGCGATTTT TTAAACATATTTAACATAGC
Product: putative glysosyltransferase
Products: NA
Alternate protein names: Glysosyltransferase; Glycerophosphotransferase; Glycosyltransferase Involved In Cell Wall Biogenesis
Number of amino acids: Translated: 847; Mature: 846
Protein sequence:
>847_residues MGEGRGEGISTHIHHIHPLTHPNTMPTPTIIKTLATQREKPFISVVTPTWNRSAFLPYLLYMYRYQDYPADRRELIILDD SPQSHQHIIDRLTNGTPEAFNIRYIHHPEKLPLGKKRNMLNELARGEYILCMDDDDYYPADKISWTIAKMQKHRALISGS DQIPIWYSHINRIFQSRSFGPHNILNGTFCYHRNYLKKHRYDDDCNLGEEKSFTDNFSVNPLQLPGERTILCISHSHNTF DKDFILGASTPVNAALTDIVSDPLLRNAYLSLHNATHHQGINHQTIDQVVVVNLDKRPDRLQQIREELALLHIPPEKITR LAASEDQNGQRGRRQSHLQALRLAQQHGWQNYLLLEDDAVILKQEKHIQVLNTLLASLAKIPWQVMILGGEISQGTMLKS LPGLVHARDCRKVCAYLVNRRYYPQLAQQMSNDEHSLEDGWQPLLRADKWLACYPSLSYQRPGFSDIEKKMTDNIAHYFN KLPAITKPSALPIADTIGFFMETSFHYALYRPIITALQAQGQGCTLVINDRVFKPFLDEMLETLKSIDDPQLKGMRLSEM QAHGQRVKCLVSPYHTPALNGLAAVNVRAMYGLAKETWNHADWNRFYQRILCYSHYSQRALAHFGNAKAVGNPRFDAWHN GTFDRILPENIQPDSRKPTVLYAPTFGALSSLPHWAEKLGRLSGNVNLICKLHHGTCSRPEEAASLALARRHLKQRTDSV HHTLALLAKADYVLTDNSGFIFDAIHVDKRVILLDFPEMAALLDGEKSYSTPESADQQIREILPVAHDVAELRYLLSEAF DWGALLARLKEIRHHYCDAFMDGKAGERAAMVIVEALAGKESSGICR
Sequences:
>Translated_847_residues MGEGRGEGISTHIHHIHPLTHPNTMPTPTIIKTLATQREKPFISVVTPTWNRSAFLPYLLYMYRYQDYPADRRELIILDD SPQSHQHIIDRLTNGTPEAFNIRYIHHPEKLPLGKKRNMLNELARGEYILCMDDDDYYPADKISWTIAKMQKHRALISGS DQIPIWYSHINRIFQSRSFGPHNILNGTFCYHRNYLKKHRYDDDCNLGEEKSFTDNFSVNPLQLPGERTILCISHSHNTF DKDFILGASTPVNAALTDIVSDPLLRNAYLSLHNATHHQGINHQTIDQVVVVNLDKRPDRLQQIREELALLHIPPEKITR LAASEDQNGQRGRRQSHLQALRLAQQHGWQNYLLLEDDAVILKQEKHIQVLNTLLASLAKIPWQVMILGGEISQGTMLKS LPGLVHARDCRKVCAYLVNRRYYPQLAQQMSNDEHSLEDGWQPLLRADKWLACYPSLSYQRPGFSDIEKKMTDNIAHYFN KLPAITKPSALPIADTIGFFMETSFHYALYRPIITALQAQGQGCTLVINDRVFKPFLDEMLETLKSIDDPQLKGMRLSEM QAHGQRVKCLVSPYHTPALNGLAAVNVRAMYGLAKETWNHADWNRFYQRILCYSHYSQRALAHFGNAKAVGNPRFDAWHN GTFDRILPENIQPDSRKPTVLYAPTFGALSSLPHWAEKLGRLSGNVNLICKLHHGTCSRPEEAASLALARRHLKQRTDSV HHTLALLAKADYVLTDNSGFIFDAIHVDKRVILLDFPEMAALLDGEKSYSTPESADQQIREILPVAHDVAELRYLLSEAF DWGALLARLKEIRHHYCDAFMDGKAGERAAMVIVEALAGKESSGICR >Mature_846_residues GEGRGEGISTHIHHIHPLTHPNTMPTPTIIKTLATQREKPFISVVTPTWNRSAFLPYLLYMYRYQDYPADRRELIILDDS PQSHQHIIDRLTNGTPEAFNIRYIHHPEKLPLGKKRNMLNELARGEYILCMDDDDYYPADKISWTIAKMQKHRALISGSD QIPIWYSHINRIFQSRSFGPHNILNGTFCYHRNYLKKHRYDDDCNLGEEKSFTDNFSVNPLQLPGERTILCISHSHNTFD KDFILGASTPVNAALTDIVSDPLLRNAYLSLHNATHHQGINHQTIDQVVVVNLDKRPDRLQQIREELALLHIPPEKITRL AASEDQNGQRGRRQSHLQALRLAQQHGWQNYLLLEDDAVILKQEKHIQVLNTLLASLAKIPWQVMILGGEISQGTMLKSL PGLVHARDCRKVCAYLVNRRYYPQLAQQMSNDEHSLEDGWQPLLRADKWLACYPSLSYQRPGFSDIEKKMTDNIAHYFNK LPAITKPSALPIADTIGFFMETSFHYALYRPIITALQAQGQGCTLVINDRVFKPFLDEMLETLKSIDDPQLKGMRLSEMQ AHGQRVKCLVSPYHTPALNGLAAVNVRAMYGLAKETWNHADWNRFYQRILCYSHYSQRALAHFGNAKAVGNPRFDAWHNG TFDRILPENIQPDSRKPTVLYAPTFGALSSLPHWAEKLGRLSGNVNLICKLHHGTCSRPEEAASLALARRHLKQRTDSVH HTLALLAKADYVLTDNSGFIFDAIHVDKRVILLDFPEMAALLDGEKSYSTPESADQQIREILPVAHDVAELRYLLSEAFD WGALLARLKEIRHHYCDAFMDGKAGERAAMVIVEALAGKESSGICR
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG3306
COG function: function code M; Glycosyltransferase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96501; Mature: 96370
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEGRGEGISTHIHHIHPLTHPNTMPTPTIIKTLATQREKPFISVVTPTWNRSAFLPYLL CCCCCCCCCEEHHHEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH YMYRYQDYPADRRELIILDDSPQSHQHIIDRLTNGTPEAFNIRYIHHPEKLPLGKKRNML HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHH NELARGEYILCMDDDDYYPADKISWTIAKMQKHRALISGSDQIPIWYSHINRIFQSRSFG HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC PHNILNGTFCYHRNYLKKHRYDDDCNLGEEKSFTDNFSVNPLQLPGERTILCISHSHNTF CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCC DKDFILGASTPVNAALTDIVSDPLLRNAYLSLHNATHHQGINHQTIDQVVVVNLDKRPDR CCCEEECCCCCHHHHHHHHHHCHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCCHH LQQIREELALLHIPPEKITRLAASEDQNGQRGRRQSHLQALRLAQQHGWQNYLLLEDDAV HHHHHHHHHEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEE ILKQEKHIQVLNTLLASLAKIPWQVMILGGEISQGTMLKSLPGLVHARDCRKVCAYLVNR EEECHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCC RYYPQLAQQMSNDEHSLEDGWQPLLRADKWLACYPSLSYQRPGFSDIEKKMTDNIAHYFN CHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH KLPAITKPSALPIADTIGFFMETSFHYALYRPIITALQAQGQGCTLVINDRVFKPFLDEM HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHH LETLKSIDDPQLKGMRLSEMQAHGQRVKCLVSPYHTPALNGLAAVNVRAMYGLAKETWNH HHHHHCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCC ADWNRFYQRILCYSHYSQRALAHFGNAKAVGNPRFDAWHNGTFDRILPENIQPDSRKPTV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LYAPTFGALSSLPHWAEKLGRLSGNVNLICKLHHGTCSRPEEAASLALARRHLKQRTDSV EECCCHHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH HHTLALLAKADYVLTDNSGFIFDAIHVDKRVILLDFPEMAALLDGEKSYSTPESADQQIR HHHHHHHHHCCEEEECCCCEEEEEEECCCEEEEEECHHHHHHHCCCCCCCCCCHHHHHHH EILPVAHDVAELRYLLSEAFDWGALLARLKEIRHHYCDAFMDGKAGERAAMVIVEALAGK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC ESSGICR CCCCCCC >Mature Secondary Structure GEGRGEGISTHIHHIHPLTHPNTMPTPTIIKTLATQREKPFISVVTPTWNRSAFLPYLL CCCCCCCCEEHHHEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH YMYRYQDYPADRRELIILDDSPQSHQHIIDRLTNGTPEAFNIRYIHHPEKLPLGKKRNML HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHH NELARGEYILCMDDDDYYPADKISWTIAKMQKHRALISGSDQIPIWYSHINRIFQSRSFG HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC PHNILNGTFCYHRNYLKKHRYDDDCNLGEEKSFTDNFSVNPLQLPGERTILCISHSHNTF CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCC DKDFILGASTPVNAALTDIVSDPLLRNAYLSLHNATHHQGINHQTIDQVVVVNLDKRPDR CCCEEECCCCCHHHHHHHHHHCHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCCHH LQQIREELALLHIPPEKITRLAASEDQNGQRGRRQSHLQALRLAQQHGWQNYLLLEDDAV HHHHHHHHHEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEE ILKQEKHIQVLNTLLASLAKIPWQVMILGGEISQGTMLKSLPGLVHARDCRKVCAYLVNR EEECHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCC RYYPQLAQQMSNDEHSLEDGWQPLLRADKWLACYPSLSYQRPGFSDIEKKMTDNIAHYFN CHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH KLPAITKPSALPIADTIGFFMETSFHYALYRPIITALQAQGQGCTLVINDRVFKPFLDEM HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHH LETLKSIDDPQLKGMRLSEMQAHGQRVKCLVSPYHTPALNGLAAVNVRAMYGLAKETWNH HHHHHCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCC ADWNRFYQRILCYSHYSQRALAHFGNAKAVGNPRFDAWHNGTFDRILPENIQPDSRKPTV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LYAPTFGALSSLPHWAEKLGRLSGNVNLICKLHHGTCSRPEEAASLALARRHLKQRTDSV EECCCHHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH HHTLALLAKADYVLTDNSGFIFDAIHVDKRVILLDFPEMAALLDGEKSYSTPESADQQIR HHHHHHHHHCCEEEECCCCEEEEEEECCCEEEEEECHHHHHHHCCCCCCCCCCHHHHHHH EILPVAHDVAELRYLLSEAFDWGALLARLKEIRHHYCDAFMDGKAGERAAMVIVEALAGK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC ESSGICR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA