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The map label for this gene is yfeC

Identifier: 218700864

GI number: 218700864

Start: 2640277

End: 2640621

Strand: Direct

Name: yfeC

Synonym: ECIAI39_2541

Alternate gene names: 218700864

Gene position: 2640277-2640621 (Clockwise)

Preceding gene: 218700862

Following gene: 218700865

Centisome position: 51.45

GC content: 50.43

Gene sequence:

>345_bases
ATGACGCCAGATGAACTTGCCAGACTGACCGGCTATAGCCGCCAGACCATTAATAAATGGGTACGCAAGGAAGGCTGGAC
AACGTCACCAAAACCTGGCGTCCAGGGTGGCAAAGCCCGACTGGTTCACGTCAATGAACAGGTTCGTGAATATATTCGCA
ATGCTGAACGCCCGGAAAGTCAGGGAGAAACGCCTGCGCTTTCTGGTGATGCGCCGCTTGAAGTATTGCTGGTGACACTG
GCGAAAGAGATGACGCCAGTTGAACAAAAACAGTTTACATCCTTGCTTCTGCGGGAAGGGATTATCGGATTGTTACAACG
CTTAGGGATTCGCGATAGCAAATAA

Upstream 100 bases:

>100_bases
CAGTAGTTATTCATGTCACGGTTTCCTGTAAAGTGGTGTTATAAAATGAACTACTAATAGACCCACATACATTCAGGGAA
TTGTTATGTTCAAGGAGAGG

Downstream 100 bases:

>100_bases
TATGAAAAGATTACGCAATAAAATGACCACCGAAGAACTGGCTGAATGCCTCGGTGTGGCTAAACAAACTGTTAACCGTT
GGATCAGAGAAAAAGGCTGG

Product: putative nucleic acid-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPESQGETPALSGDAPLEVLLVTL
AKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK

Sequences:

>Translated_114_residues
MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPESQGETPALSGDAPLEVLLVTL
AKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK
>Mature_113_residues
TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPESQGETPALSGDAPLEVLLVTLA
KEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiI and P.aeruginosa rluD [H]

Homologues:

Organism=Escherichia coli, GI87082097, Length=114, Percent_Identity=98.2456140350877, Blast_Score=226, Evalue=2e-61,
Organism=Escherichia coli, GI226510963, Length=125, Percent_Identity=38.4, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010749
- InterPro:   IPR011991
- ProDom:   PD060594 [H]

Pfam domain/function: PF07037 DUF1323 [H]

EC number: NA

Molecular weight: Translated: 12780; Mature: 12649

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPES
CCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCC
QGETPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPES
CHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCC
QGETPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]