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The map label for this gene is msyB

Identifier: 218700446

GI number: 218700446

Start: 2153291

End: 2153665

Strand: Direct

Name: msyB

Synonym: ECIAI39_2112

Alternate gene names: 218700446

Gene position: 2153291-2153665 (Clockwise)

Preceding gene: 218700445

Following gene: 218700450

Centisome position: 41.96

GC content: 50.13

Gene sequence:

>375_bases
ATGACCATGTACGCAACGCTTGAAGAAGCCATTGACGCTGCACGCGAAGAATTTCTTGCAGACAACCCCGGCATCGACGC
CGAAGATGCGAATGTGCAACAGTTCAATGCCCAAAAATACGTTTTGCAGGACGGCGACATCATGTGGCAAGTTGAGTTTT
TTGCCGACGAAGGGGAAGAAGGTGAATGTTTACCTATGCTTAGCGGTGAAGCCGCGCAAAGTGTCTTTGATGGCGACTAT
GATGAGATAGAGATCCGCCAGGAGTGGCAGGAAGAGAATACATTACATGAATGGGATGAGGGGGAATTTCAGCTTGAGCC
ACCGCTGGATACTGAGGAAGGACGCGCAGCAGCTGATGAGTGGGATGAACGTTAA

Upstream 100 bases:

>100_bases
CCCCAGGTATCGAACTGATTTTTCGCCTTTCATACTTGCAAAAGCGGAGAATCAGCTATCCTTTTCCCTGAAACCTCATC
AACTCAAAGGGAGAATCGTG

Downstream 100 bases:

>100_bases
TTACTCATACGGGCCATGATGAATGTCGATCGGCAGCAGTAAAGTATCAAAAACCAGGGAGAATGGCAGATCAAGGATCG
TGACATAACGCCAGGCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQDGDIMWQVEFFADEGEEGECLPMLSGEAAQSVFDGDY
DEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRAAADEWDER

Sequences:

>Translated_124_residues
MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQDGDIMWQVEFFADEGEEGECLPMLSGEAAQSVFDGDY
DEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRAAADEWDER
>Mature_123_residues
TMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQDGDIMWQVEFFADEGEEGECLPMLSGEAAQSVFDGDYD
EIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRAAADEWDER

Specific function: Could participate in the normal pathway of protein export

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081827, Length=124, Percent_Identity=100, Blast_Score=248, Evalue=1e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MSYB_ECOLI (P25738)

Other databases:

- EMBL:   X59939
- EMBL:   U00096
- EMBL:   AP009048
- RefSeq:   AP_001678.1
- RefSeq:   NP_415569.4
- ProteinModelPortal:   P25738
- DIP:   DIP-10265N
- STRING:   P25738
- EnsemblBacteria:   EBESCT00000000675
- EnsemblBacteria:   EBESCT00000014546
- GeneID:   945612
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1039
- KEGG:   eco:b1051
- EchoBASE:   EB1314
- EcoGene:   EG11338
- eggNOG:   NOG11534
- GeneTree:   EBGT00050000009052
- HOGENOM:   HBG416346
- OMA:   QTAADEW
- ProtClustDB:   PRK11467
- BioCyc:   EcoCyc:EG11338-MONOMER
- Genevestigator:   P25738

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14259; Mature: 14128

Theoretical pI: Translated: 3.34; Mature: 3.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQDGDIMWQVEFFADEGEE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCC
GECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRAAADE
CCEEECCCCHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCC
WDER
CCCC
>Mature Secondary Structure 
TMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQDGDIMWQVEFFADEGEE
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCC
GECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRAAADE
CCEEECCCCHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCC
WDER
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1537791; 8905232; 9278503