Definition | Escherichia coli IAI39 chromosome, complete genome. |
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Accession | NC_011750 |
Length | 5,132,068 |
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The map label for this gene is 218700306
Identifier: 218700306
GI number: 218700306
Start: 2024306
End: 2025733
Strand: Direct
Name: 218700306
Synonym: ECIAI39_1961
Alternate gene names: NA
Gene position: 2024306-2025733 (Clockwise)
Preceding gene: 218700305
Following gene: 218700307
Centisome position: 39.44
GC content: 57.28
Gene sequence:
>1428_bases ATGGCAGCTAACTATCTGCATGGTCCCGAAACCATTGAGGTGGAAAACGGTGCCCGCCCGGTTAAAACGGTGAAATCTGC CGTTATTGGCCTGATTGGTACCGCCCCGATGGGGGATGTCAATACGCTGGTACAGTGCCTGTCTGAGAAAGACGCAGCGG CATTTGGCAGCCAGTTCACCGGCTTTACCATTCCGCAGGCGCTGGATGCGATTTATGACCATGGTGCAGGTACCGTTCTG GTCATTAACGTCCTCGACCCGGCGAAACATAAAACGGCGATCGAGGATGAGGTGGTTACCTTTGACAAATCGACAGGGCA GGCCAGACTGGCGCATCCGGTTGTCGCTAATGTGGTGGTGAAAAACAGTGAAGGCAGCACCACCCACACGGCGAACACGG ACTACCGTGTTGATGCGCAGGCGGGTGTGCTCACGAACCTGGGCAAGGCTATTGAGGCCGGTGGCAGCGTGAAGGTGAGC TATGAGTACGCGGACCCGTCGAAGGTGACTGCGGCGGACATCATCGGCGGGGTGAACAGCGCCGGAAACCGAACCGGCAT GAAGCTGCTTAACGACAGCTTCAACCTGTACGGCTATTTCGCCAAAATTCTGATTGCGCCGGTGTTCTGCACCCAGAAGA GTGTCGCAGTTGAGCTTATCGCCATGGCAGAGAAGCTGGGCGCGGTAACCTACATTGATGCGCCTGTCGGTACCACCTTT GCACAGGCTCTGGCAGGTCGTGGCCCGGAAGGCACCATCAACTTCAATACCAGCTCCGACCGCGTCCGTCTGTGCTATCC GCATGTGAAGGTATATGACCCGGTGACAAACACAGAGCGTCTGGAGCCGCTCAGCCAGCGTGCAGCAGGTCTGCGTGCCA GAGTCGATCTGGACAAGGGCTACTGGTGGTCATCCTCCAATCAGGAGATTCTGGGGATCACCGGCGTGGAGCGCCAGCTG TCCGCGATGATTGATGACCCGCAGAGTGAGGTGAACCTGCTTAACGAACAGGGGATCACCACGGTATTCAGCAGTTACGG CAGCGGCCTTCGTCTGTGGGGTAACCGGACGGCAGCATGGCCAACGGTCACCCATATGCGTAACTTTGAGAACGTTCGCC GCACCGGTGATGTGATCAACGAGTCCATTCGTTATTTCAGCCAGCAGTACATCGACATGCCGATTACTCAGGCGCTGATT GATGCACTGACGGAGTCGGTCAACGCCTACGGTCGCAAAATGACTGGTGATGGTGCGGTACTGGGCTTCCGTTGCTGGTT TGATCCGGCCCGCAATCCGGAGACGGAGCTGGCCGCCGGGCACCTGTTGCTGAGCTACAAATATACGCCACCACCGCCGC TGGAGCGACTGACGTTTGAGACTGAGATCACCTCGGAATACCTGTTAACCCTGAAAGGGGGCAACTGA
Upstream 100 bases:
>100_bases ACGCCGGTACCTGAAGAGACTAAACCCGCCGGCACACCGGCTGTGCAGTCACCAAAGCGCAGAAGCAGCAGTGACAGCGA AGTGAAAACGGAGGACACCC
Downstream 100 bases:
>100_bases TGTCAAAGATTGAGATAAACCGCATCACGAATGCCAACATCTATCTGGATGGTACTAACCTGCTGGGACGGGCTGAGGAA GTTAAACTCCCCGATGCCTC
Product: putative phage tail sheath protein
Products: NA
Alternate protein names: Phage Tail Sheath Protein; Bacteriophage Tail Sheath Protein; Phage Tail Sheath Protein FI; Phage Tail Sheath Protein; Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; LOW QUALITY PROTEIN Phage Tail Sheath Protein; Phage-Related Tail Protein; Phage TAIL SHEATH PROTEIN; Phage Tail Sheath-Like Protein; Prophage; Prophage Tail Sheath; Phage P2 Tail Sheath FI-Like Protein; Phage Tail Sheath Family Protein; Tail Sheath Protein Bacteriophage; Bacteriophage Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein GPFI; Phage Tail Sheath Protein FI-Like Protein; Pyocin R2_PP Tail Sheath Protein GpFI; Pyocin R2_PP Tail Sheath Protein; Bacteriophage Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein; Bacteriophage Contractile Tail Sheath Protein
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MAANYLHGPETIEVENGARPVKTVKSAVIGLIGTAPMGDVNTLVQCLSEKDAAAFGSQFTGFTIPQALDAIYDHGAGTVL VINVLDPAKHKTAIEDEVVTFDKSTGQARLAHPVVANVVVKNSEGSTTHTANTDYRVDAQAGVLTNLGKAIEAGGSVKVS YEYADPSKVTAADIIGGVNSAGNRTGMKLLNDSFNLYGYFAKILIAPVFCTQKSVAVELIAMAEKLGAVTYIDAPVGTTF AQALAGRGPEGTINFNTSSDRVRLCYPHVKVYDPVTNTERLEPLSQRAAGLRARVDLDKGYWWSSSNQEILGITGVERQL SAMIDDPQSEVNLLNEQGITTVFSSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYIDMPITQALI DALTESVNAYGRKMTGDGAVLGFRCWFDPARNPETELAAGHLLLSYKYTPPPPLERLTFETEITSEYLLTLKGGN
Sequences:
>Translated_475_residues MAANYLHGPETIEVENGARPVKTVKSAVIGLIGTAPMGDVNTLVQCLSEKDAAAFGSQFTGFTIPQALDAIYDHGAGTVL VINVLDPAKHKTAIEDEVVTFDKSTGQARLAHPVVANVVVKNSEGSTTHTANTDYRVDAQAGVLTNLGKAIEAGGSVKVS YEYADPSKVTAADIIGGVNSAGNRTGMKLLNDSFNLYGYFAKILIAPVFCTQKSVAVELIAMAEKLGAVTYIDAPVGTTF AQALAGRGPEGTINFNTSSDRVRLCYPHVKVYDPVTNTERLEPLSQRAAGLRARVDLDKGYWWSSSNQEILGITGVERQL SAMIDDPQSEVNLLNEQGITTVFSSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYIDMPITQALI DALTESVNAYGRKMTGDGAVLGFRCWFDPARNPETELAAGHLLLSYKYTPPPPLERLTFETEITSEYLLTLKGGN >Mature_474_residues AANYLHGPETIEVENGARPVKTVKSAVIGLIGTAPMGDVNTLVQCLSEKDAAAFGSQFTGFTIPQALDAIYDHGAGTVLV INVLDPAKHKTAIEDEVVTFDKSTGQARLAHPVVANVVVKNSEGSTTHTANTDYRVDAQAGVLTNLGKAIEAGGSVKVSY EYADPSKVTAADIIGGVNSAGNRTGMKLLNDSFNLYGYFAKILIAPVFCTQKSVAVELIAMAEKLGAVTYIDAPVGTTFA QALAGRGPEGTINFNTSSDRVRLCYPHVKVYDPVTNTERLEPLSQRAAGLRARVDLDKGYWWSSSNQEILGITGVERQLS AMIDDPQSEVNLLNEQGITTVFSSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYIDMPITQALID ALTESVNAYGRKMTGDGAVLGFRCWFDPARNPETELAAGHLLLSYKYTPPPPLERLTFETEITSEYLLTLKGGN
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51339; Mature: 51208
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANYLHGPETIEVENGARPVKTVKSAVIGLIGTAPMGDVNTLVQCLSEKDAAAFGSQFT CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC GFTIPQALDAIYDHGAGTVLVINVLDPAKHKTAIEDEVVTFDKSTGQARLAHPVVANVVV CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE KNSEGSTTHTANTDYRVDAQAGVLTNLGKAIEAGGSVKVSYEYADPSKVTAADIIGGVNS ECCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCCC AGNRTGMKLLNDSFNLYGYFAKILIAPVFCTQKSVAVELIAMAEKLGAVTYIDAPVGTTF CCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCHHH AQALAGRGPEGTINFNTSSDRVRLCYPHVKVYDPVTNTERLEPLSQRAAGLRARVDLDKG HHHHHCCCCCCEEEECCCCCEEEEEECCEEEECCCCCHHHHCHHHHHHCCCEEEEECCCC YWWSSSNQEILGITGVERQLSAMIDDPQSEVNLLNEQGITTVFSSYGSGLRLWGNRTAAW EEECCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCC PTVTHMRNFENVRRTGDVINESIRYFSQQYIDMPITQALIDALTESVNAYGRKMTGDGAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEECCCCCE LGFRCWFDPARNPETELAAGHLLLSYKYTPPPPLERLTFETEITSEYLLTLKGGN EEEEEECCCCCCCCCHHEECEEEEEEECCCCCCHHHEEEEEECCCEEEEEEECCC >Mature Secondary Structure AANYLHGPETIEVENGARPVKTVKSAVIGLIGTAPMGDVNTLVQCLSEKDAAAFGSQFT CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC GFTIPQALDAIYDHGAGTVLVINVLDPAKHKTAIEDEVVTFDKSTGQARLAHPVVANVVV CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE KNSEGSTTHTANTDYRVDAQAGVLTNLGKAIEAGGSVKVSYEYADPSKVTAADIIGGVNS ECCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCCC AGNRTGMKLLNDSFNLYGYFAKILIAPVFCTQKSVAVELIAMAEKLGAVTYIDAPVGTTF CCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCHHH AQALAGRGPEGTINFNTSSDRVRLCYPHVKVYDPVTNTERLEPLSQRAAGLRARVDLDKG HHHHHCCCCCCEEEECCCCCEEEEEECCEEEECCCCCHHHHCHHHHHHCCCEEEEECCCC YWWSSSNQEILGITGVERQLSAMIDDPQSEVNLLNEQGITTVFSSYGSGLRLWGNRTAAW EEECCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCC PTVTHMRNFENVRRTGDVINESIRYFSQQYIDMPITQALIDALTESVNAYGRKMTGDGAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEECCCCCE LGFRCWFDPARNPETELAAGHLLLSYKYTPPPPLERLTFETEITSEYLLTLKGGN EEEEEECCCCCCCCCHHEECEEEEEEECCCCCCHHHEEEEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA