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The map label for this gene is ycgX

Identifier: 218700262

GI number: 218700262

Start: 1990921

End: 1991325

Strand: Direct

Name: ycgX

Synonym: ECIAI39_1915

Alternate gene names: 218700262

Gene position: 1990921-1991325 (Clockwise)

Preceding gene: 218700261

Following gene: 218700263

Centisome position: 38.79

GC content: 36.79

Gene sequence:

>405_bases
ATGGATCAGGTCGTTGTTTTTCAAAAGATGTTTGAGCAAGTGAGAAAAGAGCAAAACTTCTCCTGGTTTTATTCAGAATT
AAAACATCACCGTATTGCACATTACATTTATTATCTAGCTACGGATAACATCAGAATTATTACTCACGATGACACGGTTT
TGTTATTAAGAGGAACCAGGAACCTGTTAAAAGTTAGTACGACCAAGAACCCTGCTAAAATAAAAGAGGCCGCATTGCTT
CATATTTGCGGAAAATCTACATTTCGGGAATACTGTTCAACACTGGCAGACGCGGGCGTTTTCCGGTGGGTTACTGATGT
TAATCATAACAAACGCAGTTACTACGCCATTGATAATACGCTTTTATATATTGAAGATGTAGAAAACAATAAACCATTAA
TCTAG

Upstream 100 bases:

>100_bases
ACTTTGTACATATCACAGCCAAAGGACAGACCAGATTGAAGTGGTAAAACCGATCGTGCACACTACGCAGTCTCACAACT
AACAAGAGGTTATTATCCTG

Downstream 100 bases:

>100_bases
CTAAAGTTGGATGCTTAAAAAATGCTTCATAATTCAGTAAGGCATTAGCATAATGGAAATAAAAGTGCAGAGACTATTCA
TATGGATGAGTAATACTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALL
HICGKSTFREYCSTLADAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI

Sequences:

>Translated_134_residues
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALL
HICGKSTFREYCSTLADAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI
>Mature_134_residues
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALL
HICGKSTFREYCSTLADAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI

Specific function: Unknown

COG id: COG5562

COG function: function code R; Phage envelope protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybcV and ydfO [H]

Homologues:

Organism=Escherichia coli, GI1787408, Length=134, Percent_Identity=99.2537313432836, Blast_Score=278, Evalue=8e-77,
Organism=Escherichia coli, GI87081931, Length=134, Percent_Identity=44.0298507462687, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI87081758, Length=129, Percent_Identity=44.1860465116279, Blast_Score=123, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009833
- ProDom:   PD021249 [H]

Pfam domain/function: PF07166 DUF1398 [H]

EC number: NA

Molecular weight: Translated: 15827; Mature: 15827

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCEEEEEECCEEEEEECCC
NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLADAGVFRWVTDVNHNKRSYYAIDNT
CEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCE
LLYIEDVENNKPLI
EEEEEECCCCCCCC
>Mature Secondary Structure
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCEEEEEECCEEEEEECCC
NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLADAGVFRWVTDVNHNKRSYYAIDNT
CEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCE
LLYIEDVENNKPLI
EEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]