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The map label for this gene is ftrA

Identifier: 218700189

GI number: 218700189

Start: 1919355

End: 1920368

Strand: Direct

Name: ftrA

Synonym: ECIAI39_1838

Alternate gene names: 218700189

Gene position: 1919355-1920368 (Clockwise)

Preceding gene: 218700187

Following gene: 218700193

Centisome position: 37.4

GC content: 49.8

Gene sequence:

>1014_bases
TTGCACTTACCGCCTCTCGATATGCCAGAAAAGCGCAAAATGATGACAATTTCACAACGCCCCCTGGTCGTTGTCTTGGC
CTATGATGGGCTATGTACTTTTGAATTTGGCGTCGCAGTTGAAATATTCGGCCTTCCACGCCCGGAAATGGGTGATAACT
GGTATCGGTTTGCTGTCGCTGCGGTAGAAGCCGGTGCGTTGCAAGCCACTGGTGGGATCCGGGTGGTTGCGGATGGAGGG
CTGGAGTTACTTACCGACGCCGATATGATTATTATTCCCGGTTGGCGTGGAGTAGATGAACCGGTGCCAGAGATGCTATG
TGAGGCGTTACGCGAAACTCACCAGCGAGGAACTCGTCTGGTATCGATATGTTCTGGTGTATTTGTTCTTGCCGCCGCAG
GCCTTCTTCACCAGCGTAAAGCGACCACCCACTGGCGCTACACTGAACAACTCCAACATCGTTACCCTTCTATTCATGTA
TGTGACAATGTTTTATATCAGGATGAAGGACAAGTCATGACTTCCGCAGGGAGTGCTGCAGGGATCGATCTGTGCTTACA
TATCGTGCGTAAAGATTATGGTCACGAAATTGCAAACAATGTCGCCCAACGGCTAGTCATCCAGCCGCATCGCCACGGAG
AACAACCACAAAACATGACGCGTCCGATGGCTTCGTCGCGAGAAAGCCAGACGTTTGGCGCATTATTCGACTTTTTACAG
CAAAATCTGGCGCAAACGCATACCGTTGCCTCTCTTGCCGGGCGAGTGAACATGAGCCAACGCACTTTTTTAAGACGTTT
TGCCGCCTTAACGGGTATGACACCTGCCCGCTGGCTGCTTAATGAGCGGTTAATTCGCGTGCAGGATTATCTGCAAAATT
CGGCTTTCAGCATCGATAAAATTGCCGAGCTGACGGGGTTTGGCAATTCAGCCTTACTAAGGCATCATTTTCTACAGCGT
TTTTTATTATCTCCTTCGCAATACAGAAAAAACAGCCGTCCTCCTTCACATTAA

Upstream 100 bases:

>100_bases
TTCGGCAATGTCCGGCGTCGCGGCTGTAAATTCAGTGACATAATGCATAGTGCTTTTTCCTATTGGTTTATTGTGTTAAC
AATAATGTAACCGACAAACC

Downstream 100 bases:

>100_bases
TCACCTAATTCAGCCTTCGTTTAGGTTACCTCTGCTAATATCTTTCTCATTGAGATGAAAATTAAGGTAAGCGAGGAAAC
ACACCACACCATAAACGGAG

Product: transcriptional activator FtrA

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MHLPPLDMPEKRKMMTISQRPLVVVLAYDGLCTFEFGVAVEIFGLPRPEMGDNWYRFAVAAVEAGALQATGGIRVVADGG
LELLTDADMIIIPGWRGVDEPVPEMLCEALRETHQRGTRLVSICSGVFVLAAAGLLHQRKATTHWRYTEQLQHRYPSIHV
CDNVLYQDEGQVMTSAGSAAGIDLCLHIVRKDYGHEIANNVAQRLVIQPHRHGEQPQNMTRPMASSRESQTFGALFDFLQ
QNLAQTHTVASLAGRVNMSQRTFLRRFAALTGMTPARWLLNERLIRVQDYLQNSAFSIDKIAELTGFGNSALLRHHFLQR
FLLSPSQYRKNSRPPSH

Sequences:

>Translated_337_residues
MHLPPLDMPEKRKMMTISQRPLVVVLAYDGLCTFEFGVAVEIFGLPRPEMGDNWYRFAVAAVEAGALQATGGIRVVADGG
LELLTDADMIIIPGWRGVDEPVPEMLCEALRETHQRGTRLVSICSGVFVLAAAGLLHQRKATTHWRYTEQLQHRYPSIHV
CDNVLYQDEGQVMTSAGSAAGIDLCLHIVRKDYGHEIANNVAQRLVIQPHRHGEQPQNMTRPMASSRESQTFGALFDFLQ
QNLAQTHTVASLAGRVNMSQRTFLRRFAALTGMTPARWLLNERLIRVQDYLQNSAFSIDKIAELTGFGNSALLRHHFLQR
FLLSPSQYRKNSRPPSH
>Mature_337_residues
MHLPPLDMPEKRKMMTISQRPLVVVLAYDGLCTFEFGVAVEIFGLPRPEMGDNWYRFAVAAVEAGALQATGGIRVVADGG
LELLTDADMIIIPGWRGVDEPVPEMLCEALRETHQRGTRLVSICSGVFVLAAAGLLHQRKATTHWRYTEQLQHRYPSIHV
CDNVLYQDEGQVMTSAGSAAGIDLCLHIVRKDYGHEIANNVAQRLVIQPHRHGEQPQNMTRPMASSRESQTFGALFDFLQ
QNLAQTHTVASLAGRVNMSQRTFLRRFAALTGMTPARWLLNERLIRVQDYLQNSAFSIDKIAELTGFGNSALLRHHFLQR
FLLSPSQYRKNSRPPSH

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 37809; Mature: 37809

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLPPLDMPEKRKMMTISQRPLVVVLAYDGLCTFEFGVAVEIFGLPRPEMGDNWYRFAVA
CCCCCCCCCCCHHHEEECCCCEEEEEEECCEEEEECCCEEEEECCCCCCCCCCHHHHHHH
AVEAGALQATGGIRVVADGGLELLTDADMIIIPGWRGVDEPVPEMLCEALRETHQRGTRL
HHHCCCEEECCCEEEEECCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
VSICSGVFVLAAAGLLHQRKATTHWRYTEQLQHRYPSIHVCDNVLYQDEGQVMTSAGSAA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCEECCCCCEEECCCCHH
GIDLCLHIVRKDYGHEIANNVAQRLVIQPHRHGEQPQNMTRPMASSRESQTFGALFDFLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
QNLAQTHTVASLAGRVNMSQRTFLRRFAALTGMTPARWLLNERLIRVQDYLQNSAFSIDK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
IAELTGFGNSALLRHHFLQRFLLSPSQYRKNSRPPSH
HHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCC
>Mature Secondary Structure
MHLPPLDMPEKRKMMTISQRPLVVVLAYDGLCTFEFGVAVEIFGLPRPEMGDNWYRFAVA
CCCCCCCCCCCHHHEEECCCCEEEEEEECCEEEEECCCEEEEECCCCCCCCCCHHHHHHH
AVEAGALQATGGIRVVADGGLELLTDADMIIIPGWRGVDEPVPEMLCEALRETHQRGTRL
HHHCCCEEECCCEEEEECCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
VSICSGVFVLAAAGLLHQRKATTHWRYTEQLQHRYPSIHVCDNVLYQDEGQVMTSAGSAA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCEECCCCCEEECCCCHH
GIDLCLHIVRKDYGHEIANNVAQRLVIQPHRHGEQPQNMTRPMASSRESQTFGALFDFLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
QNLAQTHTVASLAGRVNMSQRTFLRRFAALTGMTPARWLLNERLIRVQDYLQNSAFSIDK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
IAELTGFGNSALLRHHFLQRFLLSPSQYRKNSRPPSH
HHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8157602 [H]