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The map label for this gene is ynbC

Identifier: 218700083

GI number: 218700083

Start: 1796065

End: 1797831

Strand: Direct

Name: ynbC

Synonym: ECIAI39_1714

Alternate gene names: 218700083

Gene position: 1796065-1797831 (Clockwise)

Preceding gene: 218700082

Following gene: 218700084

Centisome position: 35.0

GC content: 50.76

Gene sequence:

>1767_bases
ATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCGGCACTGGCCCAC
TTTACAGCCGGGTGCGAAAAAGGTCATCGTCTTATTTCATCGCGGTCATCGCGGTCATGAACATTCTGGTCGTCTACAAC
ATATCGTTGATGAACTGGCGATGCCAGATACTGCTTTTTATGCATGGGATGCCCGAGGGCATGGACAAACTTCGGGGCCG
CGTGGTTATAGTCCGTCTCTTGCGCGTTCAGTGCAGGATGTCGATGAATTTGTCCGTTTTGCTGCCAGCGACAGCCAGGT
CGGACTGGAAGAGGTGGTTGTGATCGCGCAAAGCGTCGGCGCAGTGATGGTTGCTACATGGGTTCATGATTATGCGCCTG
CTATTCGCGGGCTGGTGCTGGCTTCTCCGGCCTTTAAGGTTAAATTGTATGTGCCGCTGGCACGTCCTGCGCTGGCGTTA
TGGCATCGTCTGCGTGGTCTGTTTTTTATTAATTCCTATGTGAAAGGACGCTATTTGACTCACGATCGGCAACGGGTGGC
GAGTTTCAATAATGATCCGCTGATCACACGGGCGATTGCCGTTAATATCTTGCTCGATCTTTATAAAACGTCTGAACGTA
TTGTTAGCGATGCGGCGGCGATTACGCTCCCCACGCAACTTCTGATATCAGGCGATGACTATGTGGTGCATCGCCAACCG
CAGATTGATTTTTATCAGCGTTTACGTAGCCCTCTCAAAGAGCTGTATCTGCTGCCAGGCTTTTATCACGACACGTTGGG
TGAAGAGAACAGGGCGCTGGTATTTGAAAAAATGCAAAGCTTTATTAGTCATTTATATGCTAACAAGTCACAAAAATTTG
ATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCAGGTGGACCCGTGCCATTATCGCCG
GTTGATTTGGCGTATCGCTTTATGCGTAAAGCGATGAAATTGTTCGGGACGCACTCTGCGGGCCTGCATCTCGGAATGAG
CACCGGCTTTGATTCAGGCAGTTCGCTGGATTATGTCTATCAAAATCAACCGCAAGGTAGTAACGCATTCGGGCGCTTAA
TCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAA
GCCGTTGCCGATCTCCACGCCAAAGGTTTAGCCGTCCGCGTGGTTGACATTGCCGCAGGGCATGGGCGCTATGTACTGGA
TGCGCTGGCAAACGAGCCTGCCGTAAGCGATATTTTGTTACGTGATTACAGCGAGTTAAATGTTGCACAGGGGCAAGAGA
TGATTGCTCAACGGGGAATGTCTGGGCGGGTGCGTTTTGAACAGGGCGATGCGTTTAACCCGGAGGAACTCAGCGCGTTA
ACTCCGCGGCCTACGCTGGCGATTGTCTCTGGACTGTATGAGCTTTTTCCCGAAAATGAGCAGGTAAAAAACTCACTCGC
AGGTCTTGCCAATGCCATCGATCCGGGTGGCATTCTCCTCTACACCGGGCAGCCGTGGCACCCACAACTGGAGCTGATTG
CCGGGGTGTTAACCAGTCATAAAGATGGTAAACCGTGGGTAATGCGCGTGCGTTCGCAAGGGGAGATGGATTCGCTCGTG
CATGATGCCGGATTCGATAAATGCACACAACGGATTGATGTGTGGGGCATTTTTACGGTTTCGATGGCGGTGCGTCGTGA
CAACTGA

Upstream 100 bases:

>100_bases
ACATGGCGGACTCCTTGACAGGATTGACTCATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATTCGCTACTGCTGTT
ACTGAAGGAAAATAGAGAAA

Downstream 100 bases:

>100_bases
ACGCCGGAACGTATTGCTACAAGGAGCTGGCTGGTTATTGTTGCTGGCCCCGTTTTTCTTCTTCACCTATGGATTTCTTA
ATCAGTTCACCGCGACTCAG

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MENSRIPGEHFFTTSDNTALFYRHWPTLQPGAKKVIVLFHRGHRGHEHSGRLQHIVDELAMPDTAFYAWDARGHGQTSGP
RGYSPSLARSVQDVDEFVRFAASDSQVGLEEVVVIAQSVGAVMVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALAL
WHRLRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQP
QIDFYQRLRSPLKELYLLPGFYHDTLGEENRALVFEKMQSFISHLYANKSQKFDYQHEDCTGPSADRWRLLSGGPVPLSP
VDLAYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQILIKQ
AVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSAL
TPRPTLAIVSGLYELFPENEQVKNSLAGLANAIDPGGILLYTGQPWHPQLELIAGVLTSHKDGKPWVMRVRSQGEMDSLV
HDAGFDKCTQRIDVWGIFTVSMAVRRDN

Sequences:

>Translated_588_residues
MENSRIPGEHFFTTSDNTALFYRHWPTLQPGAKKVIVLFHRGHRGHEHSGRLQHIVDELAMPDTAFYAWDARGHGQTSGP
RGYSPSLARSVQDVDEFVRFAASDSQVGLEEVVVIAQSVGAVMVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALAL
WHRLRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQP
QIDFYQRLRSPLKELYLLPGFYHDTLGEENRALVFEKMQSFISHLYANKSQKFDYQHEDCTGPSADRWRLLSGGPVPLSP
VDLAYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQILIKQ
AVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSAL
TPRPTLAIVSGLYELFPENEQVKNSLAGLANAIDPGGILLYTGQPWHPQLELIAGVLTSHKDGKPWVMRVRSQGEMDSLV
HDAGFDKCTQRIDVWGIFTVSMAVRRDN
>Mature_588_residues
MENSRIPGEHFFTTSDNTALFYRHWPTLQPGAKKVIVLFHRGHRGHEHSGRLQHIVDELAMPDTAFYAWDARGHGQTSGP
RGYSPSLARSVQDVDEFVRFAASDSQVGLEEVVVIAQSVGAVMVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALAL
WHRLRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQP
QIDFYQRLRSPLKELYLLPGFYHDTLGEENRALVFEKMQSFISHLYANKSQKFDYQHEDCTGPSADRWRLLSGGPVPLSP
VDLAYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQILIKQ
AVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSAL
TPRPTLAIVSGLYELFPENEQVKNSLAGLANAIDPGGILLYTGQPWHPQLELIAGVLTSHKDGKPWVMRVRSQGEMDSLV
HDAGFDKCTQRIDVWGIFTVSMAVRRDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787678, Length=588, Percent_Identity=96.0884353741497, Blast_Score=1168, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 65738; Mature: 65738

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSRIPGEHFFTTSDNTALFYRHWPTLQPGAKKVIVLFHRGHRGHEHSGRLQHIVDELA
CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHC
MPDTAFYAWDARGHGQTSGPRGYSPSLARSVQDVDEFVRFAASDSQVGLEEVVVIAQSVG
CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AVMVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLT
HHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEC
HDRQRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQP
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECEEEEECCCCEEEECCC
QIDFYQRLRSPLKELYLLPGFYHDTLGEENRALVFEKMQSFISHLYANKSQKFDYQHEDC
CHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
TGPSADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVY
CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEE
QNQPQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAG
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECC
HGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSAL
CCHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHCC
TPRPTLAIVSGLYELFPENEQVKNSLAGLANAIDPGGILLYTGQPWHPQLELIAGVLTSH
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCC
KDGKPWVMRVRSQGEMDSLVHDAGFDKCTQRIDVWGIFTVSMAVRRDN
CCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHEEEEEEEEEEECCC
>Mature Secondary Structure
MENSRIPGEHFFTTSDNTALFYRHWPTLQPGAKKVIVLFHRGHRGHEHSGRLQHIVDELA
CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHC
MPDTAFYAWDARGHGQTSGPRGYSPSLARSVQDVDEFVRFAASDSQVGLEEVVVIAQSVG
CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AVMVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLT
HHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEC
HDRQRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQP
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECEEEEECCCCEEEECCC
QIDFYQRLRSPLKELYLLPGFYHDTLGEENRALVFEKMQSFISHLYANKSQKFDYQHEDC
CHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
TGPSADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVY
CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEE
QNQPQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAG
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECC
HGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSAL
CCHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHCC
TPRPTLAIVSGLYELFPENEQVKNSLAGLANAIDPGGILLYTGQPWHPQLELIAGVLTSH
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCC
KDGKPWVMRVRSQGEMDSLVHDAGFDKCTQRIDVWGIFTVSMAVRRDN
CCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]