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The map label for this gene is ydiS

Identifier: 218699737

GI number: 218699737

Start: 1424593

End: 1425882

Strand: Reverse

Name: ydiS

Synonym: ECIAI39_1358

Alternate gene names: 218699737

Gene position: 1425882-1424593 (Counterclockwise)

Preceding gene: 218699738

Following gene: 218699736

Centisome position: 27.78

GC content: 54.19

Gene sequence:

>1290_bases
ATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGTTGCCGGTAGCGTTGCCGCACTGGTCATGGCGCAAGC
CGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTAAAAACATGACCGGCGGGCGTCTTTATGCCCACA
CACTTGAAGCGATTATTCCAGGCTTTGCAGCATCAGCGCCGGTAGAACGCAAGGTCACACGCGAGAAAATCTCCTTCTTA
ACCGATGAGAGTGCCGTTACCCTCGATTTTCACCGCGAGCAACCAGATGTTCCGCAACACGCGTCTTATACCGTATTGCG
TAATCGTCTGGACCCGTGGTTGATGGAACAAGCCGAACAGGCTGGCGCGCAGTTTATCCCGGGCGTTCGTGTCGATGCGC
TGGTTCGTGAAGGAAACAAGGTCACTGGCGTCCAGGCCGGGGATGATATTCTCGAAGCGAATGTGGTGATTCTGGCTGAT
GGCGTTAACTCGATGCTTGGCCGCTCGCTGGGAATGGTTCCCGCTTCCGATCCGCATCATTACGCTGTTGGTGTTAAAGA
AGTTATTGGCCTCACACCAGAACAGATCAAGGATCGCTTTAATATTACGGGCGAGGAAGGTGCCGCCTGGCTGTTTGCCG
GTTCCCCTTCTGACGGCCTGATGGGCGGCGGATTCCTCTATACCAATAAGGATTCCATATCGTTGGGGCTGGTTTGTGGA
TTGGGTGATATCGCCCATGCGCAAAAAAGCGTGCCGCAAATGCTGGAAGATTTTAAACAACACCCCGCCATTCGCCCGCT
GATTAGCGGAGGCAAACTGCTTGAATATTCCGCGCATATGGTGCCAGAAGGCGGTCTGGCAATGGTGCCGCAACTGGTTA
ACGAGGGCGTGATGATCGTTGGTGACGCCGCAGGCTTCTGCCTGAATTTGGGTTTTACGGTCCGCGGCATGGATTTAGCC
ATTGCATCGGCTCAGGCTGCCGCCACAACAGTGATTGCAGCCAAAGAACGCGCGGATTTCTCCGCCAGCAGTCTTGCGCA
ATACAAACGTGAGCTGGAACAAAGCTGCGTCATGCGTGATATGCAGCATTTTCGCAAGATCCCGGCGCTGATGGAAAATC
CGCGCCTGTTTAGTCAGTATCCGCGCATGGTCGCCGACATCATGAACGAGATGTTCACCATTGACGGCAAACCAAACCAT
CCGGTACGCAAAATGATCATGGGACACGCGAAGAAAATTGGGCTGATCAACTTGCTGAAAGATGGCATTAAGGGAGCAAC
CGCGCTATGA

Upstream 100 bases:

>100_bases
TATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGCCGCTAATTCCCCTTTCAACCACATCTCCCGCTGTAAACGC
AGCGGGAAGGGAGCATACGC

Downstream 100 bases:

>100_bases
GCCAGAACGCTACGGTTAACGTCGACATCAAATTAGGCGTCAATAAATTCCATGTTGATGAGGGACACCCGCATATCATT
TTGGCGGCAAATCCCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MSDDKFDAIVVGAGVAGSVAALVMAQAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASAPVERKVTREKISFL
TDESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD
GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQIKDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLA
IASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNH
PVRKMIMGHAKKIGLINLLKDGIKGATAL

Sequences:

>Translated_429_residues
MSDDKFDAIVVGAGVAGSVAALVMAQAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASAPVERKVTREKISFL
TDESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD
GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQIKDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLA
IASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNH
PVRKMIMGHAKKIGLINLLKDGIKGATAL
>Mature_428_residues
SDDKFDAIVVGAGVAGSVAALVMAQAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASAPVERKVTREKISFLT
DESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADG
VNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQIKDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCGL
GDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLAI
ASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNHP
VRKMIMGHAKKIGLINLLKDGIKGATAL

Specific function: Probably accepts electrons from ydiQ/ydiR and reduces a quinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF-QO/fixC family [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=401, Percent_Identity=26.1845386533666, Blast_Score=118, Evalue=1e-26,
Organism=Escherichia coli, GI1787991, Length=429, Percent_Identity=98.8344988344988, Blast_Score=869, Evalue=0.0,
Organism=Escherichia coli, GI1786227, Length=429, Percent_Identity=60.8391608391608, Blast_Score=528, Evalue=1e-151,
Organism=Escherichia coli, GI87082155, Length=428, Percent_Identity=41.8224299065421, Blast_Score=331, Evalue=6e-92,
Organism=Caenorhabditis elegans, GI25144720, Length=444, Percent_Identity=25.9009009009009, Blast_Score=116, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6324932, Length=416, Percent_Identity=25.4807692307692, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24652256, Length=408, Percent_Identity=27.6960784313726, Blast_Score=121, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.5.5.-

Molecular weight: Translated: 45877; Mature: 45745

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDKFDAIVVGAGVAGSVAALVMAQAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP
CCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHC
GFAASAPVERKVTREKISFLTDESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
AGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHH
CCHHCCCCCHHHHHHHCCCEEECCCCCCCHHCCCEEEEECCHHHHHHHHCCCCCCCCCCC
YAVGVKEVIGLTPEQIKDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG
CCCCHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEC
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIV
CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHCCCCCCHHHHHHHHCCCEEEE
GDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRD
ECCCCEEEECCEEEECCCEEEHHHHHHHHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHH
MQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNHPVRKMIMGHAKKIGLINLLK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHH
DGIKGATAL
HCCCCCCCC
>Mature Secondary Structure 
SDDKFDAIVVGAGVAGSVAALVMAQAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP
CCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHC
GFAASAPVERKVTREKISFLTDESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
AGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHH
CCHHCCCCCHHHHHHHCCCEEECCCCCCCHHCCCEEEEECCHHHHHHHHCCCCCCCCCCC
YAVGVKEVIGLTPEQIKDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG
CCCCHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEC
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIV
CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHCCCCCCHHHHHHHHCCCEEEE
GDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRD
ECCCCEEEECCEEEECCCEEEHHHHHHHHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHH
MQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNHPVRKMIMGHAKKIGLINLLK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHH
DGIKGATAL
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]