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The map label for this gene is arpB [H]

Identifier: 218699713

GI number: 218699713

Start: 1398313

End: 1400211

Strand: Reverse

Name: arpB [H]

Synonym: ECIAI39_1334

Alternate gene names: 218699713

Gene position: 1400211-1398313 (Counterclockwise)

Preceding gene: 218699727

Following gene: 218699712

Centisome position: 27.28

GC content: 39.02

Gene sequence:

>1899_bases
ATGAGTCAAAACGACATTATTATCAGAACTCATTATAAGTCTCCTCATAGAATGCACATCGATAGCGACATACCAACGCC
TTCATCAGAGCCTATTAATCAATTTGCGCGCCAACTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATGCTGTCAT
ACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAAC
TTTGCCACTTCACCCATCCATGCAGAAAATATACTCATTACATTACACTATAAAAAAGAAATCATTTCCTTACTTCTGGA
AACCACGCCCATTAAAGCTAACCATTTGCGAAGCATACTGGATTATATTGAACAGGAACAGTTAACTGCCGAAAATCGTA
ACCATTGTATGAAACTGTCTAAAAAAATCCATAGAGAAAAAACTATACAACCAACAGTAAATCTCAATGGTAGTGCATTT
TTTTCGCAATCTCCTTCTGACGCTATTTTTTGTCGCCATCTGTCATTGCAATACGCACTTGATTCACTGAGAAATGGAAA
AGGCAAAGTCAATCTGATTAAACATTACTCCTCCGTTGAATCCATACAGCAGCATGTTCCCTTAGTCCGGGACGCAGAGT
TCAGATCATTACTTCGCCATCCTCCTGCAGGGAGTCGCGTTATCGCGAGTAAAGATTTTGGCTTCGCTTTAGATATTTTC
TTCTGTCGAATGATGGCAAACAATGTCAGTCATATGTCCGCGATTTTATATATAGACAATCATACTTTGTCAGTAAGGCT
ACGAATAAAGCAGTCGGCGTATGGGCAATTAAATTATGTCGTGTCCGTTTACGACCCGAACGATACCAACGTTGCCGTCA
GAGGCACCCACAGGACAGCACGGGGCTTTCTCTCGCTCGATAAATTCATCAGTTCAGGTCCCGATGCTCAGACCTGGGCT
GATATGTATGTTCGCAACTGTGCAATTGCTTTTCTGCCCCTATTACCTGAGGGAGTTCCAGGGGCTATTTTCGCGGGTAT
TGCATCACAAATGCCATTTGCCCCTATACATCCATCGGCAATGTTGTTAATAATGGCCACAGGCCAGACTCAACAGCTTA
TTACATTATTCAAACAGTTACCCATACTCCCTGAAAAAGAAATCATTGAAATAATAACTGCGCAGAATAGCGTTGGTACA
CCTGCATTATTTTTGGCTATGATGAACGGACATACTGACAACGTGAAAATATTTATGCAAGAAGTTCAGTCACTGGTAGA
TAATCATATCATTCATGAAGATAATCTGGTTAAATTACTGCAAACTAAAAGTGCTAACGAAACACCTGGACTCTATATCT
CCATGTTGTATGGATTCGATGAAATAATCGATATCTTTCTGAATGCATTAACCACTCCAATAACACAAGAGCTTTTAAGC
AAAAAAATGGTGATGGATATTTTAGCAATGAAAACACGTGATGGTGAGCCAGGATTATATGCCGCAATGGAAAATAATCA
CCCTTTGTGTGTCACACGGTTCCTCTCTAAAGTTTATGGAATCGCTGTTAAATATAACCTCAGCAAAATTAACATCATGG
ATTTATTAAAAGGCGCAACAGCACATGGAGCCCCTGCTTTATACATCGCCATGAGTAAGGGTAATAAAGACGTCGTGTTA
TCTTATATATCAACGCTGGGTACTTTTGCAAAAAAATATTCTTTTAGTCAATGTCAGTTATTCACATTGTTGGCCGCTAA
AAATCATGACAACATGTCAGCTGTTCATATAGCCATTCATCATAATCATTATAAAACTGTAGAAACATATTATGCTGCTA
TAAACGTAATCAGCCAAAGCCTGAGTTTTAGTGCTGATGAGCTAAAGACGTATTTATAA

Upstream 100 bases:

>100_bases
GACACAATTCTTATAGCAATTTTTCGTGCACATTTCGTTCTGGCGATAATAATTAATCATCATCCTCAAAACCTCCAGAC
ATATATAAGGCGAAAAGATT

Downstream 100 bases:

>100_bases
CCAGATATTTATATATCGATACATAATTTTATTTTTTTCATAAACCGCAAAAACAGTGATCAGGTGTACAACGCCACCCG
ACGGCTGTAATAACAAAAAA

Product: putative ankyrin repeat regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 631

Protein sequence:

>632_residues
MSQNDIIIRTHYKSPHRMHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEFTANCRKISQNCYSTALFTIN
FATSPIHAENILITLHYKKEIISLLLETTPIKANHLRSILDYIEQEQLTAENRNHCMKLSKKIHREKTIQPTVNLNGSAF
FSQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRSLLRHPPAGSRVIASKDFGFALDIF
FCRMMANNVSHMSAILYIDNHTLSVRLRIKQSAYGQLNYVVSVYDPNDTNVAVRGTHRTARGFLSLDKFISSGPDAQTWA
DMYVRNCAIAFLPLLPEGVPGAIFAGIASQMPFAPIHPSAMLLIMATGQTQQLITLFKQLPILPEKEIIEIITAQNSVGT
PALFLAMMNGHTDNVKIFMQEVQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPITQELLS
KKMVMDILAMKTRDGEPGLYAAMENNHPLCVTRFLSKVYGIAVKYNLSKINIMDLLKGATAHGAPALYIAMSKGNKDVVL
SYISTLGTFAKKYSFSQCQLFTLLAAKNHDNMSAVHIAIHHNHYKTVETYYAAINVISQSLSFSADELKTYL

Sequences:

>Translated_632_residues
MSQNDIIIRTHYKSPHRMHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEFTANCRKISQNCYSTALFTIN
FATSPIHAENILITLHYKKEIISLLLETTPIKANHLRSILDYIEQEQLTAENRNHCMKLSKKIHREKTIQPTVNLNGSAF
FSQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRSLLRHPPAGSRVIASKDFGFALDIF
FCRMMANNVSHMSAILYIDNHTLSVRLRIKQSAYGQLNYVVSVYDPNDTNVAVRGTHRTARGFLSLDKFISSGPDAQTWA
DMYVRNCAIAFLPLLPEGVPGAIFAGIASQMPFAPIHPSAMLLIMATGQTQQLITLFKQLPILPEKEIIEIITAQNSVGT
PALFLAMMNGHTDNVKIFMQEVQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPITQELLS
KKMVMDILAMKTRDGEPGLYAAMENNHPLCVTRFLSKVYGIAVKYNLSKINIMDLLKGATAHGAPALYIAMSKGNKDVVL
SYISTLGTFAKKYSFSQCQLFTLLAAKNHDNMSAVHIAIHHNHYKTVETYYAAINVISQSLSFSADELKTYL
>Mature_631_residues
SQNDIIIRTHYKSPHRMHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEFTANCRKISQNCYSTALFTINF
ATSPIHAENILITLHYKKEIISLLLETTPIKANHLRSILDYIEQEQLTAENRNHCMKLSKKIHREKTIQPTVNLNGSAFF
SQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRSLLRHPPAGSRVIASKDFGFALDIFF
CRMMANNVSHMSAILYIDNHTLSVRLRIKQSAYGQLNYVVSVYDPNDTNVAVRGTHRTARGFLSLDKFISSGPDAQTWAD
MYVRNCAIAFLPLLPEGVPGAIFAGIASQMPFAPIHPSAMLLIMATGQTQQLITLFKQLPILPEKEIIEIITAQNSVGTP
ALFLAMMNGHTDNVKIFMQEVQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPITQELLSK
KMVMDILAMKTRDGEPGLYAAMENNHPLCVTRFLSKVYGIAVKYNLSKINIMDLLKGATAHGAPALYIAMSKGNKDVVLS
YISTLGTFAKKYSFSQCQLFTLLAAKNHDNMSAVHIAIHHNHYKTVETYYAAINVISQSLSFSADELKTYL

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Escherichia coli, GI1790447, Length=628, Percent_Identity=29.2993630573248, Blast_Score=253, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR012927 [H]

Pfam domain/function: PF07906 Toxin_15 [H]

EC number: NA

Molecular weight: Translated: 70768; Mature: 70637

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS00447 DNA_POLYMERASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNDIIIRTHYKSPHRMHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEF
CCCCCEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TANCRKISQNCYSTALFTINFATSPIHAENILITLHYKKEIISLLLETTPIKANHLRSIL
HHHHHHHHHHHHEEEEEEEEECCCCEECCEEEEEEEEHHHHHHHHHHCCCCCHHHHHHHH
DYIEQEQLTAENRNHCMKLSKKIHREKTIQPTVNLNGSAFFSQSPSDAIFCRHLSLQYAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCCCEEHHHHHHHHHH
DSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRSLLRHPPAGSRVIASKDFGFALDIF
HHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHH
FCRMMANNVSHMSAILYIDNHTLSVRLRIKQSAYGQLNYVVSVYDPNDTNVAVRGTHRTA
HHHHHHCCCCCEEEEEEEECCEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCHHH
RGFLSLDKFISSGPDAQTWADMYVRNCAIAFLPLLPEGVPGAIFAGIASQMPFAPIHPSA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCE
MLLIMATGQTQQLITLFKQLPILPEKEIIEIITAQNSVGTPALFLAMMNGHTDNVKIFMQ
EEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHH
EVQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPITQELLS
HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEHHHCHHHHHHHHHHHHCCHHHHHHHH
KKMVMDILAMKTRDGEPGLYAAMENNHPLCVTRFLSKVYGIAVKYNLSKINIMDLLKGAT
HHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCEEEEEECCEEHHHHHHCCCC
AHGAPALYIAMSKGNKDVVLSYISTLGTFAKKYSFSQCQLFTLLAAKNHDNMSAVHIAIH
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCEEEEEEEE
HNHYKTVETYYAAINVISQSLSFSADELKTYL
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure 
SQNDIIIRTHYKSPHRMHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEF
CCCCEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TANCRKISQNCYSTALFTINFATSPIHAENILITLHYKKEIISLLLETTPIKANHLRSIL
HHHHHHHHHHHHEEEEEEEEECCCCEECCEEEEEEEEHHHHHHHHHHCCCCCHHHHHHHH
DYIEQEQLTAENRNHCMKLSKKIHREKTIQPTVNLNGSAFFSQSPSDAIFCRHLSLQYAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCCCEEHHHHHHHHHH
DSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRSLLRHPPAGSRVIASKDFGFALDIF
HHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHH
FCRMMANNVSHMSAILYIDNHTLSVRLRIKQSAYGQLNYVVSVYDPNDTNVAVRGTHRTA
HHHHHHCCCCCEEEEEEEECCEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCHHH
RGFLSLDKFISSGPDAQTWADMYVRNCAIAFLPLLPEGVPGAIFAGIASQMPFAPIHPSA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCE
MLLIMATGQTQQLITLFKQLPILPEKEIIEIITAQNSVGTPALFLAMMNGHTDNVKIFMQ
EEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHH
EVQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPITQELLS
HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEHHHCHHHHHHHHHHHHCCHHHHHHHH
KKMVMDILAMKTRDGEPGLYAAMENNHPLCVTRFLSKVYGIAVKYNLSKINIMDLLKGAT
HHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCEEEEEECCEEHHHHHHCCCC
AHGAPALYIAMSKGNKDVVLSYISTLGTFAKKYSFSQCQLFTLLAAKNHDNMSAVHIAIH
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCEEEEEEEE
HNHYKTVETYYAAINVISQSLSFSADELKTYL
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]