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The map label for this gene is yjjU

Identifier: 218698214

GI number: 218698214

Start: 5125773

End: 5126846

Strand: Direct

Name: yjjU

Synonym: EC55989_5039

Alternate gene names: 218698214

Gene position: 5125773-5126846 (Clockwise)

Preceding gene: 218698213

Following gene: 218698215

Centisome position: 99.44

GC content: 54.28

Gene sequence:

>1074_bases
GTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTGAGGCCGTTCCAGCCTGGACGGATTGCTCT
GGTGTGCGAAGGCGGCGGACAGCGTGGAATTTTCACGGCTGGCGTGCTGGATGAGTTTATGCGCGCGCAGTTTAATCCTT
TCGATCTTTATCTCGGCACATCTGCCGGGGCGCAGAACCTCTCGGCGTATATCTGCAATCAGCCCGGTTACGCGCGCAAA
GTCATCATGCGCTATACCACAAAACGCGAATTTTTCGATCCATTGCGCTTTGTCCGTGGAGGAAATCTTATCGATCTCGA
CTGGCTGGTGGAGGCCACCGCAAGCCAGATGCCGTTGCAAATGGATACCGCAGCGCGGCTATTTGACAGCGGCAAATCGT
TTTATATGTGCGCTTGTCGTCAGGATGACTATGCGCCGAATTACTTTTTGCCAACCAAACAGAACTGGCTGGATGTGATT
CGCGCCTCCAGTGCGATACCTGGCTTTTATCGTAGCGGAGTGTCGCTGGAAGGCATTAACTACCTGGATGGCGGGATCAG
TGATGCGATTCCGGTTAAAGAGGCGGCAAGGCAGGGCGCTAAAACGTTGGTCGTCATCCGCACCGTGCCGTCGCAAATGT
ACTACACGCCGCAGTGGTTCAAACGCATGGAACGCTGGCTGGGTGACAGTAGCCTGCAGCCGCTGGTCAATCTGGTGCAG
CATCATGAAACCAGCTATCGTGAGATTCAGCAATTTATTGAGAAACCACCGGGCCAGCTGCGGATATTCGAAATTTATCC
GCCGAAGCCATTGCATAGTATTGCGCTCGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGTG
GGCGTTATTTTCTGGCAACGGTCGGTAAGTTATTGACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACG
CCGGAATCGATAGTCATTCCGCCTGCGCCAGTCGCTAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAA
CGACCCGACATTTAACAATGAGGATCTGGCTTGA

Upstream 100 bases:

>100_bases
TTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCCTTCTTTCACA
ACAAAAACAGGAAGGCAGAG

Downstream 100 bases:

>100_bases
TTTGCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGTGATGAAGAGGCCAGCCTGCAACGCGCG
GCGCAAGCGGGCGTAGGCAA

Product: putative esterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAYICNQPGYARK
VIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVI
RASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQ
HHETSYREIQQFIEKPPGQLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVT
PESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA

Sequences:

>Translated_357_residues
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAYICNQPGYARK
VIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVI
RASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQ
HHETSYREIQQFIEKPPGQLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVT
PESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
>Mature_356_residues
GQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAYICNQPGYARKV
IMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIR
ASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQH
HETSYREIQQFIEKPPGQLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTP
ESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=357, Percent_Identity=99.1596638655462, Blast_Score=733, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 39862; Mature: 39731

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGT
CCCCCCEEECCCCCCEECCCCCCCEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEEEC
SAGAQNLSAYICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQ
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCH
MDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGIN
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCC
YLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQ
CCCCCCCCCCCHHHHHHCCCCEEEEEEECCCHHEECHHHHHHHHHHHCCCCHHHHHHHHH
HHETSYREIQQFIEKPPGQLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLAT
HCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
HHHHHHCCCCHHHCCEEEECCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGT
CCCCCEEECCCCCCEECCCCCCCEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEEEC
SAGAQNLSAYICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQ
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCH
MDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGIN
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCC
YLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQ
CCCCCCCCCCCHHHHHHCCCCEEEEEEECCCHHEECHHHHHHHHHHHCCCCHHHHHHHHH
HHETSYREIQQFIEKPPGQLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLAT
HCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
HHHHHHCCCCHHHCCEEEECCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]