Click here to switch to the map view.

The map label for this gene is yjfK

Identifier: 218697932

GI number: 218697932

Start: 4856869

End: 4857528

Strand: Direct

Name: yjfK

Synonym: EC55989_4738

Alternate gene names: 218697932

Gene position: 4856869-4857528 (Clockwise)

Preceding gene: 218697931

Following gene: 218697933

Centisome position: 94.22

GC content: 46.97

Gene sequence:

>660_bases
ATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCTGCTATCGCTCGCGGTCCGCTGGGACTTCATCTCAA
TAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTA
CGGTAGCCGCTGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAATTTCTG
CAAATCAATACCACCGGCGGCGAAGATATTGATGACATTGATGATATCAAGCTCTTTGTCTATGAAGAGAGCTACGGTAT
CAGTAAAGAGAGTCACTGGCGCGAGGCGATCAACGCCAAAGTGATGGGGGCAATGATCTTAAACTGGCAGGAAAAACGCT
GGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCGTCTACATGCTGGAAAAAGTAGAAAATCAAAACCAT
GCCAAATGGGAGGTCCATAATTTTACCATGGGCTACCAACGCCAAGTAACCGAAGATACTTACGAATATTTGCTGTTAAA
TGGTGAGGAATCTTTTAACGATCTCGGCGAGCCAGAGTGGTTATTTTCGCGCGCGTTGGGTGTCGATATCCCGCTGACAT
CACTTCATATTATTGGTTAA

Upstream 100 bases:

>100_bases
GTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGCCAGCCTCGCTAAAAGGCTGGC
AACTATTTTAAGGATAAAAT

Downstream 100 bases:

>100_bases
TTACAAGGACGTTTACAATGCATATACTGGATTCACTTCTTGCCTTTAGTGCCTATTTTTTTATTGGCGTGGCTATGGTG
ATTATTTTTCTGTTTATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSHIDLGGGSQIFRYYTSGDEFL
QINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAKVMGAMILNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNH
AKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG

Sequences:

>Translated_219_residues
MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSHIDLGGGSQIFRYYTSGDEFL
QINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAKVMGAMILNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNH
AKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG
>Mature_218_residues
SGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSHIDLGGGSQIFRYYTSGDEFLQ
INTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAKVMGAMILNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHA
KWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790626, Length=219, Percent_Identity=99.0867579908676, Blast_Score=447, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019621 [H]

Pfam domain/function: PF10679 DUF2491 [H]

EC number: NA

Molecular weight: Translated: 25049; Mature: 24918

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSH
CCHHHHHHHCCCCCCCEEECCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCEEEEEEEE
IDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAK
EECCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH
VMGAMILNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHAKWEVHNFTMGYQRQVTEDT
HHHHHEECCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCHHHCCCCC
YEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG
EEEEEECCCHHHHHCCCHHHHHHHHCCCCCCHHEEEECC
>Mature Secondary Structure 
SGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSH
CHHHHHHHCCCCCCCEEECCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCEEEEEEEE
IDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAK
EECCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH
VMGAMILNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHAKWEVHNFTMGYQRQVTEDT
HHHHHEECCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCHHHCCCCC
YEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG
EEEEEECCCHHHHHCCCHHHHHHHHCCCCCCHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]