| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yjeN
Identifier: 218697909
GI number: 218697909
Start: 4830959
End: 4831273
Strand: Direct
Name: yjeN
Synonym: EC55989_4714
Alternate gene names: 218697909
Gene position: 4830959-4831273 (Clockwise)
Preceding gene: 218697908
Following gene: 218697910
Centisome position: 93.72
GC content: 50.16
Gene sequence:
>315_bases ATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGA AATAGAGCAGACGATTCTCTCTTTTGTCGATGCCTGCCACACCCGTAAAGTGGCGATGGTGGTGGGTAGCACCATTAACA CCCTCAAAGATCGCGATGGTAAACGGTGGGGAAACCTGCCGGATATTTATTGCGCTTATCTTATCCGATGTCTGGTTTTT CGCGGGGAATTAGTGGGATACGGCGATTTGTTTCGTATGCGCTATAGCGAAATTAAGCGACCGGTTACCTTATGA
Upstream 100 bases:
>100_bases GAACTATTGCAGCAGAGTGGCAAAAAACCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTGCCTGACGATAGG GCGTAAAGACAGGAAATGTT
Downstream 100 bases:
>100_bases GTGCGCGCATGTTTGTCTTGTGCTGCATCTGGTTTATTGTGGCGTTCCTCTGGATAACCATCACTTCCGCGCTGGACAAA GAGTGGATGATTGATGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MDDTSRDPAITEDEIRALQFSAGDVAEIEQTILSFVDACHTRKVAMVVGSTINTLKDRDGKRWGNLPDIYCAYLIRCLVF RGELVGYGDLFRMRYSEIKRPVTL
Sequences:
>Translated_104_residues MDDTSRDPAITEDEIRALQFSAGDVAEIEQTILSFVDACHTRKVAMVVGSTINTLKDRDGKRWGNLPDIYCAYLIRCLVF RGELVGYGDLFRMRYSEIKRPVTL >Mature_104_residues MDDTSRDPAITEDEIRALQFSAGDVAEIEQTILSFVDACHTRKVAMVVGSTINTLKDRDGKRWGNLPDIYCAYLIRCLVF RGELVGYGDLFRMRYSEIKRPVTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790601, Length=104, Percent_Identity=100, Blast_Score=216, Evalue=3e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YJEN_ECOLI (P39283)
Other databases:
- EMBL: U14003 - EMBL: U00096 - EMBL: AP009048 - PIR: S56385 - RefSeq: AP_004660.1 - RefSeq: NP_418581.1 - STRING: P39283 - EnsemblBacteria: EBESCT00000004784 - EnsemblBacteria: EBESCT00000017689 - GeneID: 948678 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW4118 - KEGG: eco:b4157 - EchoBASE: EB2369 - EcoGene: EG12476 - eggNOG: NOG13181 - GeneTree: EBGT00050000009017 - HOGENOM: HBG471061 - OMA: EIRELHF - ProtClustDB: CLSK562656 - BioCyc: EcoCyc:G7838-MONOMER - Genevestigator: P39283 - InterPro: IPR020528 - ProDom: PD069398
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11819; Mature: 11819
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDTSRDPAITEDEIRALQFSAGDVAEIEQTILSFVDACHTRKVAMVVGSTINTLKDRDG CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KRWGNLPDIYCAYLIRCLVFRGELVGYGDLFRMRYSEIKRPVTL CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDDTSRDPAITEDEIRALQFSAGDVAEIEQTILSFVDACHTRKVAMVVGSTINTLKDRDG CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KRWGNLPDIYCAYLIRCLVFRGELVGYGDLFRMRYSEIKRPVTL CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503