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The map label for this gene is tnsC [H]

Identifier: 218697195

GI number: 218697195

Start: 3996645

End: 3998093

Strand: Reverse

Name: tnsC [H]

Synonym: EC55989_3927

Alternate gene names: 218697195

Gene position: 3998093-3996645 (Counterclockwise)

Preceding gene: 218697196

Following gene: 218697194

Centisome position: 77.56

GC content: 40.23

Gene sequence:

>1449_bases
ATGAATCTTATACGGCGCGTTTCAGCGATATATAAAGAACAGGAGTTACCTGAGTATCGTGGCAATCCCTTAATTGAAGC
ACTTCCTGAAGCGCTTACGGAAGATGAAGTACTTCTGGAAATGAGTTATTTCCCCGAAATTGACGAAAAAATCCGCTGGA
CTGCCCCGGCGAATGTTAGAGAGCAGTATGTCGAACGTATAAAGAAATTCCGTTGCCCTCAAACCAATCTTATCCAGGCT
TATAAGATGATCTTACGGGCACTTAGGGAAAGCTATGCAGCTCGTAATCCTTTAAAAAGCGGAACAATTCAATATCTTCA
TTACTATGGAAATGAGCGTCCTGATATTGAGCCAGAAAGTGGATATTTTAAATCCCAGGCTGAAACTATTACGATAGTTG
GAATGAGTGGTTCTGGAAAAACTACCATGATTGAGCAAGTCATGGATCATTTCCCTCAGATTATAGAACACAGCAGCTAT
AAAGGAGTTTTTCCCGGCTTCAGTAAGCAAATTGTATGGGTAAAGATTAATTGTCCATACAATTCAAGTGTGAGAGACCT
TTGTGAAGAGATTTTACAAAAATTAGATGATGCAATTGGTATTGAACGAACTACACCTGAGATTAGAAATGGTGCTCTGG
CTCGCCAGATTGCACAAAGAATTAAATCATCATTTTTGGGTATCCTTGTTATTGATGAAATGCAGAGGCTTAAATTTTCA
AGAACCGGGGGTGAGAGTAAGTTGATTGATTTTTTACATGAAATTGTAGATTCCATGGGGGTATCTATGGTTTTTTGTGG
AAATCATCCTTTTGACGAGACGCTGACAAAGAAAATGAGAATTGCCAGGCGGGCAGAGTCTGGTGGTTACATGAAAATTA
AGAATGTTAGATACGATTCACAAGACTGGCAATCGTTTATTCATTATTTATGGCCATTACAATGGACAAATGTTGAAACT
CCATTAAATGATGAGTTAAACGAAAAATTATTCATTTTATCTAAAGGCAATATTGGATTGGCTCAGATGATTTATCGGGG
GGCACAATTAAAGGTTATCGGTAGCGGCAATGAAATCATCACTGGCGCAGTCTTGTCGGCCTCTGTACCGGTACTCGTGA
GTCATACGGAGGAATATAAGGATACTCCACTCCCGGGGGCCGCGACTGAAGATGAGGAAGCTAAATGGCTCTCTGCATCT
AATGAGGGTGATGCTTCGGCTAAAATCATGGCAGAGAAGTCCCTAAAGTCTTTGATCCCTGGGGATATAGACAGGCCACA
GCACAAGGAATTCGTAGGAAAAATAGACGAGGTTTTGCGCAATTTCGACGAGAAAATACTGTCTCTTGACCACGATCTTG
TTATCAACAGAACAGCTGAAAAGAAAAATACCTACGATGCTCTTCAGCGTTGCGGGCTTATAAATATAGATCCACTTAAT
AAATTGTAA

Upstream 100 bases:

>100_bases
AACCCCTACTTCCTTCATCCAGTAATGTTCTGCTTTTGCCTGGCCGGGAGGAGAAACAAAGATGGTTAAAAGGTAAGAAG
AAGACTGAGGACGCAGAATA

Downstream 100 bases:

>100_bases
TGAGGTAACAGTTCGTAACGGTCAAAGAGAGGTGTGGGAAATGAGAATGTTGCCTGTTTTGCCTGATGAATCCTTGTTCA
GCCGGTTTTGTCGGACAACT

Product: Tn7-like transposition protein TnsC

Products: NA

Alternate protein names: Protein E [H]

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPEIDEKIRWTAPANVREQYVERIKKFRCPQTNLIQA
YKMILRALRESYAARNPLKSGTIQYLHYYGNERPDIEPESGYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSY
KGVFPGFSKQIVWVKINCPYNSSVRDLCEEILQKLDDAIGIERTTPEIRNGALARQIAQRIKSSFLGILVIDEMQRLKFS
RTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYDSQDWQSFIHYLWPLQWTNVET
PLNDELNEKLFILSKGNIGLAQMIYRGAQLKVIGSGNEIITGAVLSASVPVLVSHTEEYKDTPLPGAATEDEEAKWLSAS
NEGDASAKIMAEKSLKSLIPGDIDRPQHKEFVGKIDEVLRNFDEKILSLDHDLVINRTAEKKNTYDALQRCGLINIDPLN
KL

Sequences:

>Translated_482_residues
MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPEIDEKIRWTAPANVREQYVERIKKFRCPQTNLIQA
YKMILRALRESYAARNPLKSGTIQYLHYYGNERPDIEPESGYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSY
KGVFPGFSKQIVWVKINCPYNSSVRDLCEEILQKLDDAIGIERTTPEIRNGALARQIAQRIKSSFLGILVIDEMQRLKFS
RTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYDSQDWQSFIHYLWPLQWTNVET
PLNDELNEKLFILSKGNIGLAQMIYRGAQLKVIGSGNEIITGAVLSASVPVLVSHTEEYKDTPLPGAATEDEEAKWLSAS
NEGDASAKIMAEKSLKSLIPGDIDRPQHKEFVGKIDEVLRNFDEKILSLDHDLVINRTAEKKNTYDALQRCGLINIDPLN
KL
>Mature_482_residues
MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPEIDEKIRWTAPANVREQYVERIKKFRCPQTNLIQA
YKMILRALRESYAARNPLKSGTIQYLHYYGNERPDIEPESGYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSY
KGVFPGFSKQIVWVKINCPYNSSVRDLCEEILQKLDDAIGIERTTPEIRNGALARQIAQRIKSSFLGILVIDEMQRLKFS
RTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYDSQDWQSFIHYLWPLQWTNVET
PLNDELNEKLFILSKGNIGLAQMIYRGAQLKVIGSGNEIITGAVLSASVPVLVSHTEEYKDTPLPGAATEDEEAKWLSAS
NEGDASAKIMAEKSLKSLIPGDIDRPQHKEFVGKIDEVLRNFDEKILSLDHDLVINRTAEKKNTYDALQRCGLINIDPLN
KL

Specific function: TnsABC + tnsD promote high-frequency insertion of Tn7 into a specific target site known as att-Tn7 whereas tnsABC + tnsE promote low-frequency insertion into many different sites [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR021542 [H]

Pfam domain/function: PF00004 AAA; PF11426 Tn7_TnsC [H]

EC number: NA

Molecular weight: Translated: 54872; Mature: 54872

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPEIDEKIRWTAPANVR
CCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCHHH
EQYVERIKKFRCPQTNLIQAYKMILRALRESYAARNPLKSGTIQYLHYYGNERPDIEPES
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC
GYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSYKGVFPGFSKQIVWVKINCPY
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC
NSSVRDLCEEILQKLDDAIGIERTTPEIRNGALARQIAQRIKSSFLGILVIDEMQRLKFS
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHH
RTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYDS
CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC
QDWQSFIHYLWPLQWTNVETPLNDELNEKLFILSKGNIGLAQMIYRGAQLKVIGSGNEII
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCEEEEEECCCCEE
TGAVLSASVPVLVSHTEEYKDTPLPGAATEDEEAKWLSASNEGDASAKIMAEKSLKSLIP
EHHHHHCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCC
GDIDRPQHKEFVGKIDEVLRNFDEKILSLDHDLVINRTAEKKNTYDALQRCGLINIDPLN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHCCCCCCCCCC
KL
CC
>Mature Secondary Structure
MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPEIDEKIRWTAPANVR
CCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCHHH
EQYVERIKKFRCPQTNLIQAYKMILRALRESYAARNPLKSGTIQYLHYYGNERPDIEPES
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC
GYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSYKGVFPGFSKQIVWVKINCPY
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC
NSSVRDLCEEILQKLDDAIGIERTTPEIRNGALARQIAQRIKSSFLGILVIDEMQRLKFS
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHH
RTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYDS
CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC
QDWQSFIHYLWPLQWTNVETPLNDELNEKLFILSKGNIGLAQMIYRGAQLKVIGSGNEII
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCEEEEEECCCCEE
TGAVLSASVPVLVSHTEEYKDTPLPGAATEDEEAKWLSASNEGDASAKIMAEKSLKSLIP
EHHHHHCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCC
GDIDRPQHKEFVGKIDEVLRNFDEKILSLDHDLVINRTAEKKNTYDALQRCGLINIDPLN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHCCCCCCCCCC
KL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2156235; 3022239; 1655576; 1317955 [H]