| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is yhaH
Identifier: 218696811
GI number: 218696811
Start: 3605953
End: 3606318
Strand: Direct
Name: yhaH
Synonym: EC55989_3521
Alternate gene names: 218696811
Gene position: 3605953-3606318 (Clockwise)
Preceding gene: 218696810
Following gene: 218696812
Centisome position: 69.95
GC content: 51.91
Gene sequence:
>366_bases ATGGACTGGTATCTGAAAGTACTAAAAAATTATGTCGGTTTCCGGGGTCGTGCGCGGCGCAAAGAGTACTGGATGTTTAT TCTGGTCAACATCATCTTTACGTTCGTGCTGGGGCTGCTGGATAAAATGTTAGGCTGGCAACGCGCTGGTGGCGAAGGCA TCCTGACGACAATCTACGGTATTCTGGTGTTTTTACCGTGGTGGGCAGTTCAGTTCCGCCGCCTGCACGACACCGACCGC TCGGCGTGGTGGGCACTGTTGTTCTTAATCCCGTTTATCGGCTGGCTTATTATCATCGTCTTTAACTGCCAGGCGGGTAC GCCAGGCGAAAACCGCTTTGGACCAGATCCGAAACTGGAACCTTAA
Upstream 100 bases:
>100_bases CTTTATTAATTCCTTGAACGAATATTTACTGCCATTTCATTCACGTCTATTCTTAATTTGCTGCTTTAAAAACAAGTGAT TGAGCAAAATTGAGGCAAAA
Downstream 100 bases:
>100_bases AACAAATCTGCTCGCCGGATGTCTGACTCATCCGGCTTTTATCATCATGTTGATGAATGAATAATTTACTAATGTTTATT TAAAATATTTCAATGTCGTT
Product: conserved hypothetical protein; putative inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDR SAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP
Sequences:
>Translated_121_residues MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDR SAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP >Mature_121_residues MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDR SAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP
Specific function: Unknown
COG id: COG3152
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yhaI
Homologues:
Organism=Escherichia coli, GI2367196, Length=121, Percent_Identity=100, Blast_Score=244, Evalue=1e-66, Organism=Escherichia coli, GI1789491, Length=118, Percent_Identity=55.9322033898305, Blast_Score=136, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YHAH_ECO57 (P64591)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: A91127 - PIR: H85971 - RefSeq: NP_289677.1 - RefSeq: NP_312012.1 - ProteinModelPortal: P64591 - EnsemblBacteria: EBESCT00000024415 - EnsemblBacteria: EBESCT00000059420 - GeneID: 916181 - GeneID: 957366 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z4457 - KEGG: ecs:ECs3985 - GeneTree: EBGT00050000010342 - HOGENOM: HBG742220 - OMA: WAWVFVI - ProtClustDB: CLSK880587 - BioCyc: ECOL83334:ECS3985-MONOMER - InterPro: IPR008523
Pfam domain/function: PF05656 DUF805
EC number: NA
Molecular weight: Translated: 14281; Mature: 14281
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1c7e4d94)-; HASH(0x1bc57780)-; HASH(0x1c790604)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYG CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC P H >Mature Secondary Structure MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYG CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC P H
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796