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The map label for this gene is yqjH

Identifier: 218696774

GI number: 218696774

Start: 3564460

End: 3565224

Strand: Reverse

Name: yqjH

Synonym: EC55989_3484

Alternate gene names: 218696774

Gene position: 3565224-3564460 (Counterclockwise)

Preceding gene: 218696776

Following gene: 218696773

Centisome position: 69.16

GC content: 56.86

Gene sequence:

>765_bases
ATGAATAACTCCCCCCGCTACCCGCAGCGCGTTCGCAATGATCTGCGCTTCCGTGAACTGACTGTGTTACGCGTTGAGCG
CATCAGCGCCGGTTTTCAGCGCATTGTCCTCGGCGGCGAGGCGCTGGACGGTTTTACATCGCGCGGCTTTGACGATCACA
GCAAACTCTTCTTTCCTCAACCTGACGCTCACTTTGTGCCGCCAACGGTAACGGAAGAGGGCATCGTCTGGCCGGAAGGA
CCACGCCCACCGTCGCGTGACTATACGCCGCTGTATGACGAACTACGCCATGAACTGGCGATCGATTTCTTTATTCACGA
CGGTGGGGTCGCCAGCGGCTGGGCGATGCAGGCGCAACCGGGCGATAAACTTACGGTGGCAGGTCCGCGCGGTTCGCTGG
TGGTGCCGGAAGATTACGCGTATCAGCTGTATGTCTGCGATGAATCCGGAATGCCCGCACTGCGCCGCCGCCTGGAAACG
TTGAGCAAACTTGCCGTTAAACCGCAAGTTAGTGCGCTGGTTAGCGTGCGGGATAACGCCTGTCAGGATTATCTCGCGCA
CCTTGATGGTTTTAATATCGAATGGCTGGCACATGATGAGCAGGCGGTAGATGCGCGTCTGGCGCAGATGCAAATCCCTG
CCGATGATTACTTCATCTGGATAACCGGCGAAGGTAAAGTCGTTAAGAATTTAAGCCGCCGCTTTGAAGCGGAACAGTAT
GACCCACAGCGGGTACGTGCAGCGGCTTACTGGCACGCAAAGTAA

Upstream 100 bases:

>100_bases
ATCAGTTCTACAAATCGCTTGCATTTATCATGATTAACAATCATTATCATTTACGAAAATTATTTAGATATATCTGATTA
CTATCACGAAGGCGATAACA

Downstream 100 bases:

>100_bases
CTGATATATAAAAAGAAAAAGGCTGACGATTTCTCGTCAGCCTTTGCTATATCTGGTGGCCCCTGCTGGACTTGAACCAG
CGACCAAGCGATTATGAGTC

Product: putative siderophore interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEG
PRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY
DPQRVRAAAYWHAK

Sequences:

>Translated_254_residues
MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEG
PRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY
DPQRVRAAAYWHAK
>Mature_254_residues
MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEG
PRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY
DPQRVRAAAYWHAK

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=254, Percent_Identity=99.6062992125984, Blast_Score=524, Evalue=1e-150,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 28858; Mature: 28858

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQ
CCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCHHEEEECCCHHCCHHHCCCCCCCEEECCC
PDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQP
CCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCEEEECCC
GDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNA
CCEEEEECCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
CQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY
HHHHHHHHCCCCEEEEECCHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHCCCCC
DPQRVRAAAYWHAK
CHHHHHEEEEECCC
>Mature Secondary Structure
MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQ
CCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCHHEEEECCCHHCCHHHCCCCCCCEEECCC
PDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQP
CCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCEEEECCC
GDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNA
CCEEEEECCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
CQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY
HHHHHHHHCCCCEEEEECCHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHCCCCC
DPQRVRAAAYWHAK
CHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]