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The map label for this gene is yqiH

Identifier: 218696751

GI number: 218696751

Start: 3538633

End: 3539382

Strand: Direct

Name: yqiH

Synonym: EC55989_3461

Alternate gene names: 218696751

Gene position: 3538633-3539382 (Clockwise)

Preceding gene: 218696750

Following gene: 218696752

Centisome position: 68.65

GC content: 39.2

Gene sequence:

>750_bases
ATGCGCTACTTAAACACAAAGAATCTCATTGCAGCAGGAGTATTACTCGCCTGCATGAGCAGCATTGCCTGGGGTGCCAT
CATCCCGGACCGTACCCGTATCATAATGAATGAGTCAGATAAAGGGGAAGCATTAAAACTTACTAATCAAAGCAAAAATC
TACCCTATCTGGCGCAAACATGGAAAGAAGATACGAAAGGCAATAAATCACGTGACTTTATTGTCACGGTTCCCCCTATG
GTACGTTTAAATCCCAGTGAGCAAATTCAAATAAGAATGATAAGTCAGGAAAAAATTGCTCAACTGCCTAATGACAGAGA
AACGCTCTTCTATTTTAACGTGCGAGAAATACCGCCAAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACG
CATTGAAACTATTCTGGCGACCAAAAGCTATTGAATTAGAAGATGATGGGGTAATGTCTTACGAAAAAGTTGAAATCATC
CGTAGAAATGATGGTTCGATCCGCTTTAACAATAAGATGCCTTATCACGTTACGCTGGGTTATATCGGAACAAACGGAAT
CACAATGTTGCCACAAACGCAAAGTTTAATGGTAACCCCTTATAGCCATGCAGATACGCAGTTTAAAAATGTTCCGTCAG
CTTTTCAGGTTGGTTATATCAATGATTTTGGTGGATTAAGTTTTTATGAAATAAACTGCCCGACGGTTAATAACTCTTGT
AATGTTTCCGTAGCCAAACGAGATAAATAA

Upstream 100 bases:

>100_bases
TGATAAATCCTGTTTTATTCAACCACCCAATAGCAGCAACTTAACCACCGGAACGGTTATTTTACCGTGTATTAGCCAAA
ATTAATTCAGGATGAAACTA

Downstream 100 bases:

>100_bases
TATGCGCTACTTATTAATTGTAATTATATTTATTATAGGTTTTAGTGCATTACCTGTATGGGCAATGGACTGCTATGCTG
AACATGAAGGGGGAAATACC

Product: periplasmic pilin chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRYLNTKNLIAAGVLLACMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQTWKEDTKGNKSRDFIVTVPPM
VRLNPSEQIQIRMISQEKIAQLPNDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMSYEKVEII
RRNDGSIRFNNKMPYHVTLGYIGTNGITMLPQTQSLMVTPYSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSC
NVSVAKRDK

Sequences:

>Translated_249_residues
MRYLNTKNLIAAGVLLACMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQTWKEDTKGNKSRDFIVTVPPM
VRLNPSEQIQIRMISQEKIAQLPNDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMSYEKVEII
RRNDGSIRFNNKMPYHVTLGYIGTNGITMLPQTQSLMVTPYSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSC
NVSVAKRDK
>Mature_249_residues
MRYLNTKNLIAAGVLLACMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQTWKEDTKGNKSRDFIVTVPPM
VRLNPSEQIQIRMISQEKIAQLPNDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMSYEKVEII
RRNDGSIRFNNKMPYHVTLGYIGTNGITMLPQTQSLMVTPYSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSC
NVSVAKRDK

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI87082203, Length=249, Percent_Identity=93.574297188755, Blast_Score=495, Evalue=1e-141,
Organism=Escherichia coli, GI1786936, Length=227, Percent_Identity=39.2070484581498, Blast_Score=177, Evalue=6e-46,
Organism=Escherichia coli, GI1788677, Length=220, Percent_Identity=38.6363636363636, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1787171, Length=244, Percent_Identity=30.7377049180328, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789532, Length=223, Percent_Identity=30.4932735426009, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1790771, Length=212, Percent_Identity=31.1320754716981, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786333, Length=241, Percent_Identity=26.9709543568465, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786743, Length=170, Percent_Identity=32.3529411764706, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788428, Length=235, Percent_Identity=25.9574468085106, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081806, Length=128, Percent_Identity=31.25, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 28400; Mature: 28400

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLNTKNLIAAGVLLACMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQT
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHH
WKEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMISQEKIAQLPNDRETLFYFNVREIPPK
HHHHCCCCCCCCEEEECCCEEEECCCCEEEEEEECHHHHHHCCCCCCEEEEEEEEECCCC
TDKKNVMQVTMQHALKLFWRPKAIELEDDGVMSYEKVEIIRRNDGSIRFNNKMPYHVTLG
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEEECCCCEEECCCCCEEEEEE
YIGTNGITMLPQTQSLMVTPYSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSC
EECCCCEEECCCCCEEEEEECCCCCCHHHCCCCEEEEEEEECCCCEEEEEEECCCCCCCC
NVSVAKRDK
CEEEEECCC
>Mature Secondary Structure
MRYLNTKNLIAAGVLLACMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQT
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHH
WKEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMISQEKIAQLPNDRETLFYFNVREIPPK
HHHHCCCCCCCCEEEECCCEEEECCCCEEEEEEECHHHHHHCCCCCCEEEEEEEEECCCC
TDKKNVMQVTMQHALKLFWRPKAIELEDDGVMSYEKVEIIRRNDGSIRFNNKMPYHVTLG
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEEECCCCEEECCCCCEEEEEE
YIGTNGITMLPQTQSLMVTPYSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSC
EECCCCEEECCCCCEEEEEECCCCCCHHHCCCCEEEEEEEECCCCEEEEEEECCCCCCCC
NVSVAKRDK
CEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]