| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is ygiZ
Identifier: 218696733
GI number: 218696733
Start: 3521969
End: 3522301
Strand: Reverse
Name: ygiZ
Synonym: EC55989_3443
Alternate gene names: 218696733
Gene position: 3522301-3521969 (Counterclockwise)
Preceding gene: 218696736
Following gene: 218696730
Centisome position: 68.33
GC content: 34.53
Gene sequence:
>333_bases ATGTTAAAGCATAAAATTCAAACAATATTTGAAGCTCTGTTATACATAATGCTTACTTATTGGTTAATAGATGCTTTTTT TGCTTTCAATAAGTATGACTGGATGCTTGAGTCGGGAGACAATATTTGCAGTATACCTTCCGTTTCAGGCGAAGATCGTA TATTGCAAGCAATGATTGCAGCATTTTTTCTTCTTACGCCACTTATTATTCTTATCTTAAGAAAACTCTTTATGCGGGAA ATGTTCGAGTTTTGGGTATATGTATTTTCGCTCGGTATTTGTCTGGTTTGTGGTTGGTGGCTTTTTTGGGGACGGTTTAT ATTTTGCTATTAG
Upstream 100 bases:
>100_bases TTTTTTGGGATTGAAAATATGGCTTTGAATAAGTAAAAGATGAAAATATCAACGTGTCATGTTGATAATTATAAATGGAT TTTTATGAGCGTACTGATAT
Downstream 100 bases:
>100_bases TAAAATCTATGAGAGTCGTTTTAACGGCTCTCATAGACAGAGAAGTTACCAGCTTACCTTCGCCTCAAATCCACCTTGTT CCGCATTCCCAAACTCAACA
Product: conserved hypothetical protein; putative inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MLKHKIQTIFEALLYIMLTYWLIDAFFAFNKYDWMLESGDNICSIPSVSGEDRILQAMIAAFFLLTPLIILILRKLFMRE MFEFWVYVFSLGICLVCGWWLFWGRFIFCY
Sequences:
>Translated_110_residues MLKHKIQTIFEALLYIMLTYWLIDAFFAFNKYDWMLESGDNICSIPSVSGEDRILQAMIAAFFLLTPLIILILRKLFMRE MFEFWVYVFSLGICLVCGWWLFWGRFIFCY >Mature_110_residues MLKHKIQTIFEALLYIMLTYWLIDAFFAFNKYDWMLESGDNICSIPSVSGEDRILQAMIAAFFLLTPLIILILRKLFMRE MFEFWVYVFSLGICLVCGWWLFWGRFIFCY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789404, Length=110, Percent_Identity=96.3636363636364, Blast_Score=195, Evalue=7e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13252; Mature: 13252
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKHKIQTIFEALLYIMLTYWLIDAFFAFNKYDWMLESGDNICSIPSVSGEDRILQAMIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHH AFFLLTPLIILILRKLFMREMFEFWVYVFSLGICLVCGWWLFWGRFIFCY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKHKIQTIFEALLYIMLTYWLIDAFFAFNKYDWMLESGDNICSIPSVSGEDRILQAMIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHH AFFLLTPLIILILRKLFMREMFEFWVYVFSLGICLVCGWWLFWGRFIFCY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]