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The map label for this gene is yqhA

Identifier: 218696712

GI number: 218696712

Start: 3501531

End: 3502025

Strand: Reverse

Name: yqhA

Synonym: EC55989_3420

Alternate gene names: 218696712

Gene position: 3502025-3501531 (Counterclockwise)

Preceding gene: 218696714

Following gene: 218696710

Centisome position: 67.94

GC content: 47.68

Gene sequence:

>495_bases
ATGGAACGTTTTCTTGAAAATGCAATGTATGCTTCTCGCTGGCTGCTTGCCCCCGTGTACTTTGGCCTTTCGCTGGCGTT
AGTTGCCCTGGCGCTGAAGTTCTTCCAGGAGATTATTCACGTACTGCCGAATATCTTCTCGATGGCGGAATCAGATTTGA
TCCTCGTGTTGCTGTCGCTGGTGGATATGACGCTGGTTGGCGGTTTGCTGGTGATGGTGATGTTTTCCGGTTATGAGAAT
TTCGTCTCACAGCTGGATATCTCCGAGAACAAAGAGAAGCTGAACTGGCTGGGGAAAATGGACGCAACGTCGCTGAAAAA
CAAAGTAGCAGCGTCGATTGTGGCAATTTCTTCCATTCACCTACTGCGCGTCTTTATGGATGCGAAAAATGTCCCGGATA
ACAAACTGATGTGGTACGTCATTATCCATCTGACGTTTGTGCTTTCTGCATTTGTGATGGGCTATCTTGACCGACTGACT
CGTCATAATCACTGA

Upstream 100 bases:

>100_bases
TTATGCGACAAAGGTTTAACGTATATGTTGATTTGCTGTTGCGTGCTGTTTACTCAATTGCGATATACTGTTGCCCGTTT
TAACTACACGACAGGAATGT

Downstream 100 bases:

>100_bases
TCTGATTCGGGCGCGGTTCGCGCGCCCGTTATTAACAGGTCATTTATCGGACGACGCCTGCCACAGATTCAGCTCGCCAT
CGGCGATATGCTGATCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPNIFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYEN
FVSQLDISENKEKLNWLGKMDATSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
RHNH

Sequences:

>Translated_164_residues
MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPNIFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYEN
FVSQLDISENKEKLNWLGKMDATSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
RHNH
>Mature_164_residues
MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPNIFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYEN
FVSQLDISENKEKLNWLGKMDATSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
RHNH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family

Homologues:

Organism=Escherichia coli, GI1789376, Length=164, Percent_Identity=100, Blast_Score=329, Evalue=6e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQHA_ECO24 (A7ZRN9)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001464468.1
- ProteinModelPortal:   A7ZRN9
- STRING:   A7ZRN9
- EnsemblBacteria:   EBESCT00000021248
- GeneID:   5586622
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_3471
- eggNOG:   COG2862
- GeneTree:   EBGT00050000009657
- HOGENOM:   HBG474035
- OMA:   MVIIGGY
- ProtClustDB:   PRK05208
- BioCyc:   ECOL331111:ECE24377A_3471-MONOMER
- HAMAP:   MF_00143
- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765
- TIGRFAMs:   TIGR00645

Pfam domain/function: PF03350 UPF0114

EC number: NA

Molecular weight: Translated: 18641; Mature: 18641

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1c63b5c4)-; HASH(0x1c974828)-; HASH(0x1c9bc98c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPNIFSMAESDLILVLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDATSLKNKVAASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLTRHNH
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPNIFSMAESDLILVLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDATSLKNKVAASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLTRHNH
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA