| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yeeV
Identifier: 218696661
GI number: 218696661
Start: 3448390
End: 3448872
Strand: Direct
Name: yeeV
Synonym: EC55989_3366
Alternate gene names: 218696661
Gene position: 3448390-3448872 (Clockwise)
Preceding gene: 218696660
Following gene: 218696662
Centisome position: 66.9
GC content: 53.62
Gene sequence:
>483_bases GTGGTTACGTTTATCTGGCTGTTTATCCGACACCGGCAGCGCCCGCAACCACCGTATAACACCGGATATCTCCCCTTTAT AACCACCTGTTACAGAGAACTTAAGATGAATACATTACCCGACACTCACGTACGGGAGGCATCGGGCTGCCCGTCTCCCA TCACCATCTGGCAGACACTGCTCACCCGACTGCTGGACCAGCACTATGGCCTCACGCTGAATGACACACCGTTCGCTGAT GAACGTGTGATTGAGCAGCATATTGAGGCAGGGATTTCACTGTGTGACGCGGTGAACTTTCTCGTTGAAAAATACGCGCT GGTACGTACCGACCAGCCGGGATTCAGCGCAGGAGCCCCGTCGCAGTTAATCAACAGCATTGATATTCTCCGGGCACGCC GGGCAACCGGCCTGATGACACGCGACAACTACAGAACGGTAAATAACATTACCCTGGGTAAACATCCGGGGGCGAAACAA TGA
Upstream 100 bases:
>100_bases GAGCTCATGCTCACCAGTGGTGAACTGAATCCCCGCCATCAGCATACCGTGACACTGTATGCGAAAGGGCTGACCTGCGA AGCCGACACCCTCGGCTCCT
Downstream 100 bases:
>100_bases AACTGGCCCTGACGCTGGAAGCCGACAGCATTAATGCGCAGGCGCTGAACATGGGGCGCATTGTCGTTGACGTCGATGGT ATTGAGCTCGCTGAACTGAT
Product: toxin of the YeeV-YeeU toxin-antitoxin system
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MVTFIWLFIRHRQRPQPPYNTGYLPFITTCYRELKMNTLPDTHVREASGCPSPITIWQTLLTRLLDQHYGLTLNDTPFAD ERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSAGAPSQLINSIDILRARRATGLMTRDNYRTVNNITLGKHPGAKQ
Sequences:
>Translated_160_residues MVTFIWLFIRHRQRPQPPYNTGYLPFITTCYRELKMNTLPDTHVREASGCPSPITIWQTLLTRLLDQHYGLTLNDTPFAD ERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSAGAPSQLINSIDILRARRATGLMTRDNYRTVNNITLGKHPGAKQ >Mature_160_residues MVTFIWLFIRHRQRPQPPYNTGYLPFITTCYRELKMNTLPDTHVREASGCPSPITIWQTLLTRLLDQHYGLTLNDTPFAD ERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSAGAPSQLINSIDILRARRATGLMTRDNYRTVNNITLGKHPGAKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ypjF and ykfI [H]
Homologues:
Organism=Escherichia coli, GI1788315, Length=124, Percent_Identity=85.4838709677419, Blast_Score=213, Evalue=4e-57, Organism=Escherichia coli, GI1788999, Length=104, Percent_Identity=66.3461538461538, Blast_Score=144, Evalue=4e-36, Organism=Escherichia coli, GI1786439, Length=110, Percent_Identity=60, Blast_Score=135, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009610 [H]
Pfam domain/function: PF06755 DUF1219 [H]
EC number: NA
Molecular weight: Translated: 18226; Mature: 18226
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTFIWLFIRHRQRPQPPYNTGYLPFITTCYRELKMNTLPDTHVREASGCPSPITIWQTL CHHHHEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHH LTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSAGAP HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH SQLINSIDILRARRATGLMTRDNYRTVNNITLGKHPGAKQ HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MVTFIWLFIRHRQRPQPPYNTGYLPFITTCYRELKMNTLPDTHVREASGCPSPITIWQTL CHHHHEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHH LTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSAGAP HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH SQLINSIDILRARRATGLMTRDNYRTVNNITLGKHPGAKQ HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]