Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is 218696630
Identifier: 218696630
GI number: 218696630
Start: 3414724
End: 3416406
Strand: Reverse
Name: 218696630
Synonym: EC55989_3330
Alternate gene names: NA
Gene position: 3416406-3414724 (Counterclockwise)
Preceding gene: 218696631
Following gene: 218696629
Centisome position: 66.28
GC content: 42.66
Gene sequence:
>1683_bases ATGACAAAATATCAGGGATATGACGTAACAGATGCCACCCATAAAACCAGTATTCATAATGACTGGAAAGTTGTTGTTGC AAAGAAAAAACCGGCGCGGGGTGTGACTTTAACTATTGGCATATTTTTCGATGGTACCGGAAACAATCGGGAGAATACAG CATCTCGCCTGATGAAATTTAATGAGTGTAGTGCAGCCAGACAGGGGGTAAATCAAAAAGATGCACAAAGCTGTGAGGAC TTTCTTAAAGAAATTAACAAGAACAGTATCTCGAATGGCAGTTATCGTGGATATTATTCCAATATTCACTGGCTTAATAT ACTCTATCATCCAGATCAGGTACTTAAAAAAGACCAGACGTCAGCTCAAATTAAGACTTACATTTCCGGGATAGGGACTG CGGCTGGTGAAGCAGATTCAGTCATAGGCATGGGATTAGGCACCAGTATTCTGGATATATTTGAAGGTGTGGTGACGAAA ACCGACGAGGCAATGGAACGAATCACCCAGGCGTTATCAGAATTTATGGGGTTCAATTTAAGTCCTGATTTTTGTATCGC AAAAATCCAGTTTGATGTTTTTGGTTTTAGCCGGGGAGCAGCGGCGGCAAGGCACTTTGCCAATCGGGTTATGGAACAGG ATCCTGCTATAGCCAGAGCTATTGCTAAAGGGCTCAGAGGCGATTTTTATGATGGTAAACCTTCTGGTGAAGTACGTTTT CTGGGGCTTTTTGATACTGTCGCAGCTATTGGTGGAATCAGTAATTTCTTCGATATTAATGGACGTAGCAACCCGGGAGT AAAGCTGGAGTTGCGTCCTTCAGTCGCGAAGAAAGTTTTCCAGATTACTGCAATGAATGAATACCGATATAATTTCAGCC TGAACAGTATTAAAGGTATGTGGCCCGAACTGGCTTTACCGGGGGCGCATTCAGATATTGGAGGTGGTTACAATCCGGTA GGTTCACCTCTGCAGGAAAATGAAAGTCTGTTTCTGAGTTGCCCGGAATTTGAAATTGTCAGTGACGATACCAGAGAAAT GGATACGCGAGTATACCGTAAAGCAGAGCAAGTCAGAAAAATGTTGATGACTCTGCCAGCCTTAAAACATATTTTGCCTC ATGGAAAACTAACCACCAAAATTCGTTCCATAGGTGTGAACAACAGCAATCAACGTCGGGCTGGTGTGATACAAAAGCAG GTGGGAGCCGCAGTATTTTTTGAGCGTATGGCAGTACCTAATGACTGGGCTAATGTTTGCCTGCGTGTGATGCTGGATGC TGCTCAGGAAGCAGGGGTATTGTTTGAACCAATTCGACAAACAAATACTGAGTTACAACTTCCATCTGAACTAATATTTC TTGCTGACAAAGCCATTGCTCAGGGAAAAGCGGTACGTTTGGGGCAAGAGCCTCAGGCTTTTACTGAGGAAGAGTTGTAT ATTATCGGAAAATACACCCATTGTTCCGCTAACTGGAATATTGAGTCTGATGGTAATTTATGGGTGGATCCTACAACGGG AGAGATTTTTATCCATCGCTTTGGTCCTAAAGGTAATAAGGCGTTCGTTTTTCCGAATAAACCAAATGATCGCTGGATTC GTTCTGTATGGTACATGGATGATCAGCAGCGATTGAATGATAACGCAGTAAAAAATACTAAAGTTATGATGTCTGGTGTT TAA
Upstream 100 bases:
>100_bases GGATCACCGATGAAAATGGTAAAACAGCGCCAGTCAACACCTCCATTCCGTCAGTAGTAAAAGTTGAGTTTGGGAAGGTA AAAATTCATGGAGAAACAGA
Downstream 100 bases:
>100_bases CGCTACAGGATGACAATACATGACCAGAGATAAAATCATTTTTATCGCACCATTATTGGCATTGTTAACTGGGTGTAATT CGGTTAGCTCACGGTATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MTKYQGYDVTDATHKTSIHNDWKVVVAKKKPARGVTLTIGIFFDGTGNNRENTASRLMKFNECSAARQGVNQKDAQSCED FLKEINKNSISNGSYRGYYSNIHWLNILYHPDQVLKKDQTSAQIKTYISGIGTAAGEADSVIGMGLGTSILDIFEGVVTK TDEAMERITQALSEFMGFNLSPDFCIAKIQFDVFGFSRGAAAARHFANRVMEQDPAIARAIAKGLRGDFYDGKPSGEVRF LGLFDTVAAIGGISNFFDINGRSNPGVKLELRPSVAKKVFQITAMNEYRYNFSLNSIKGMWPELALPGAHSDIGGGYNPV GSPLQENESLFLSCPEFEIVSDDTREMDTRVYRKAEQVRKMLMTLPALKHILPHGKLTTKIRSIGVNNSNQRRAGVIQKQ VGAAVFFERMAVPNDWANVCLRVMLDAAQEAGVLFEPIRQTNTELQLPSELIFLADKAIAQGKAVRLGQEPQAFTEEELY IIGKYTHCSANWNIESDGNLWVDPTTGEIFIHRFGPKGNKAFVFPNKPNDRWIRSVWYMDDQQRLNDNAVKNTKVMMSGV
Sequences:
>Translated_560_residues MTKYQGYDVTDATHKTSIHNDWKVVVAKKKPARGVTLTIGIFFDGTGNNRENTASRLMKFNECSAARQGVNQKDAQSCED FLKEINKNSISNGSYRGYYSNIHWLNILYHPDQVLKKDQTSAQIKTYISGIGTAAGEADSVIGMGLGTSILDIFEGVVTK TDEAMERITQALSEFMGFNLSPDFCIAKIQFDVFGFSRGAAAARHFANRVMEQDPAIARAIAKGLRGDFYDGKPSGEVRF LGLFDTVAAIGGISNFFDINGRSNPGVKLELRPSVAKKVFQITAMNEYRYNFSLNSIKGMWPELALPGAHSDIGGGYNPV GSPLQENESLFLSCPEFEIVSDDTREMDTRVYRKAEQVRKMLMTLPALKHILPHGKLTTKIRSIGVNNSNQRRAGVIQKQ VGAAVFFERMAVPNDWANVCLRVMLDAAQEAGVLFEPIRQTNTELQLPSELIFLADKAIAQGKAVRLGQEPQAFTEEELY IIGKYTHCSANWNIESDGNLWVDPTTGEIFIHRFGPKGNKAFVFPNKPNDRWIRSVWYMDDQQRLNDNAVKNTKVMMSGV >Mature_559_residues TKYQGYDVTDATHKTSIHNDWKVVVAKKKPARGVTLTIGIFFDGTGNNRENTASRLMKFNECSAARQGVNQKDAQSCEDF LKEINKNSISNGSYRGYYSNIHWLNILYHPDQVLKKDQTSAQIKTYISGIGTAAGEADSVIGMGLGTSILDIFEGVVTKT DEAMERITQALSEFMGFNLSPDFCIAKIQFDVFGFSRGAAAARHFANRVMEQDPAIARAIAKGLRGDFYDGKPSGEVRFL GLFDTVAAIGGISNFFDINGRSNPGVKLELRPSVAKKVFQITAMNEYRYNFSLNSIKGMWPELALPGAHSDIGGGYNPVG SPLQENESLFLSCPEFEIVSDDTREMDTRVYRKAEQVRKMLMTLPALKHILPHGKLTTKIRSIGVNNSNQRRAGVIQKQV GAAVFFERMAVPNDWANVCLRVMLDAAQEAGVLFEPIRQTNTELQLPSELIFLADKAIAQGKAVRLGQEPQAFTEEELYI IGKYTHCSANWNIESDGNLWVDPTTGEIFIHRFGPKGNKAFVFPNKPNDRWIRSVWYMDDQQRLNDNAVKNTKVMMSGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62349; Mature: 62217
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYQGYDVTDATHKTSIHNDWKVVVAKKKPARGVTLTIGIFFDGTGNNRENTASRLMKF CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHH NECSAARQGVNQKDAQSCEDFLKEINKNSISNGSYRGYYSNIHWLNILYHPDQVLKKDQT HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCEEEEEEEECCHHHHHCCCH SAQIKTYISGIGTAAGEADSVIGMGLGTSILDIFEGVVTKTDEAMERITQALSEFMGFNL HHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC SPDFCIAKIQFDVFGFSRGAAAARHFANRVMEQDPAIARAIAKGLRGDFYDGKPSGEVRF CCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEE LGLFDTVAAIGGISNFFDINGRSNPGVKLELRPSVAKKVFQITAMNEYRYNFSLNSIKGM EEHHHHHHHHCCCCCEEECCCCCCCCEEEEECHHHHHHHHHEEEEEEEEEEEEECCCCCC WPELALPGAHSDIGGGYNPVGSPLQENESLFLSCPEFEIVSDDTREMDTRVYRKAEQVRK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHH MLMTLPALKHILPHGKLTTKIRSIGVNNSNQRRAGVIQKQVGAAVFFERMAVPNDWANVC HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LRVMLDAAQEAGVLFEPIRQTNTELQLPSELIFLADKAIAQGKAVRLGQEPQAFTEEELY HHHHHHHHHHCCCCHHHHHHCCCCEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEE IIGKYTHCSANWNIESDGNLWVDPTTGEIFIHRFGPKGNKAFVFPNKPNDRWIRSVWYMD EEEEEEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHCCC DQQRLNDNAVKNTKVMMSGV CHHHCCCCHHCCCEEEEECC >Mature Secondary Structure TKYQGYDVTDATHKTSIHNDWKVVVAKKKPARGVTLTIGIFFDGTGNNRENTASRLMKF CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHH NECSAARQGVNQKDAQSCEDFLKEINKNSISNGSYRGYYSNIHWLNILYHPDQVLKKDQT HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCEEEEEEEECCHHHHHCCCH SAQIKTYISGIGTAAGEADSVIGMGLGTSILDIFEGVVTKTDEAMERITQALSEFMGFNL HHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC SPDFCIAKIQFDVFGFSRGAAAARHFANRVMEQDPAIARAIAKGLRGDFYDGKPSGEVRF CCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEE LGLFDTVAAIGGISNFFDINGRSNPGVKLELRPSVAKKVFQITAMNEYRYNFSLNSIKGM EEHHHHHHHHCCCCCEEECCCCCCCCEEEEECHHHHHHHHHEEEEEEEEEEEEECCCCCC WPELALPGAHSDIGGGYNPVGSPLQENESLFLSCPEFEIVSDDTREMDTRVYRKAEQVRK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHH MLMTLPALKHILPHGKLTTKIRSIGVNNSNQRRAGVIQKQVGAAVFFERMAVPNDWANVC HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LRVMLDAAQEAGVLFEPIRQTNTELQLPSELIFLADKAIAQGKAVRLGQEPQAFTEEELY HHHHHHHHHHCCCCHHHHHHCCCCEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEE IIGKYTHCSANWNIESDGNLWVDPTTGEIFIHRFGPKGNKAFVFPNKPNDRWIRSVWYMD EEEEEEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHCCC DQQRLNDNAVKNTKVMMSGV CHHHCCCCHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA