Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is 218696628
Identifier: 218696628
GI number: 218696628
Start: 3413206
End: 3413883
Strand: Reverse
Name: 218696628
Synonym: EC55989_3328
Alternate gene names: NA
Gene position: 3413883-3413206 (Counterclockwise)
Preceding gene: 218696629
Following gene: 218696627
Centisome position: 66.23
GC content: 42.63
Gene sequence:
>678_bases ATGACCAGAGATAAAATCATTTTTATCGCACCATTATTGGCATTGTTAACTGGGTGTAATTCGGTTAGCTCACGGTATGC TGATTTGGATAAGACTGAATGGGGTTATAAAAAATTACCCTATGATGAATGGAAATTTCTCTTTATTTATCCAAAGGCTC TGCCTGCGCTGGCCACCCAGGCGTTGATGGTGGACGGGGAAGGTTATAAGACGACTTATCAGTATCTTGATAATACCGAG CCGAGTCAGGTCAGTGTAGGGCGCTGGAATGACCATCTGGGCGCGACTGAGTCGTATTATAACAAGGGGAAAGCATTACC CCTGATGTTGTGTTTTTGCTGGGATTCAATAATTGATAAAAAGAGTTATGAAACTCTGATTTTTTTTAAAAAAGGGACCT GGGAGCAGATGGTTACGCCTTACGCAGACAACCGCTGGAACGAAACCTATTATCGTTCAACGATGATTATTGGTCTGGCT CCTGAAGGGAAGGTAAGAGTCTGGCTGGGAGATCGCGGTAATCCGGTGGTACCTCAGTTGGATGCTAAAATTACTACAGT ATCGGGTGATAAAATGAAGATGTGTAAGGGGGTTACTAAACATCCAGATGGATATGTTTATTACGGTGATACACCAGATT TTATCAAAGGGAAAATTTATCCCTACGGCAACTGGTGA
Upstream 100 bases:
>100_bases TTTCATCTGGCGTAAAAAAACGGGCAATAGCTGAATGATAACGCAGTAAAAAATACTAAAGTTATGATGTCTGGTGTTTA ACGCTACAGGATGACAATAC
Downstream 100 bases:
>100_bases CTCAAAGTGAAAATTTATTTTTGAGAGTATTATGTCTAAAGGTTTTGTATTGCTTGGTGATAATACCACACATGGTGGTA AAGTTATTTCTGCATCTTCA
Product: Conserved hypothetical protein. Putative exported protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTRDKIIFIAPLLALLTGCNSVSSRYADLDKTEWGYKKLPYDEWKFLFIYPKALPALATQALMVDGEGYKTTYQYLDNTE PSQVSVGRWNDHLGATESYYNKGKALPLMLCFCWDSIIDKKSYETLIFFKKGTWEQMVTPYADNRWNETYYRSTMIIGLA PEGKVRVWLGDRGNPVVPQLDAKITTVSGDKMKMCKGVTKHPDGYVYYGDTPDFIKGKIYPYGNW
Sequences:
>Translated_225_residues MTRDKIIFIAPLLALLTGCNSVSSRYADLDKTEWGYKKLPYDEWKFLFIYPKALPALATQALMVDGEGYKTTYQYLDNTE PSQVSVGRWNDHLGATESYYNKGKALPLMLCFCWDSIIDKKSYETLIFFKKGTWEQMVTPYADNRWNETYYRSTMIIGLA PEGKVRVWLGDRGNPVVPQLDAKITTVSGDKMKMCKGVTKHPDGYVYYGDTPDFIKGKIYPYGNW >Mature_224_residues TRDKIIFIAPLLALLTGCNSVSSRYADLDKTEWGYKKLPYDEWKFLFIYPKALPALATQALMVDGEGYKTTYQYLDNTEP SQVSVGRWNDHLGATESYYNKGKALPLMLCFCWDSIIDKKSYETLIFFKKGTWEQMVTPYADNRWNETYYRSTMIIGLAP EGKVRVWLGDRGNPVVPQLDAKITTVSGDKMKMCKGVTKHPDGYVYYGDTPDFIKGKIYPYGNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25852; Mature: 25721
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRDKIIFIAPLLALLTGCNSVSSRYADLDKTEWGYKKLPYDEWKFLFIYPKALPALATQ CCCCCEEHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHE ALMVDGEGYKTTYQYLDNTEPSQVSVGRWNDHLGATESYYNKGKALPLMLCFCWDSIIDK EEEECCCCCEEHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCC KSYETLIFFKKGTWEQMVTPYADNRWNETYYRSTMIIGLAPEGKVRVWLGDRGNPVVPQL CCCEEEEEEECCCHHHHCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCC DAKITTVSGDKMKMCKGVTKHPDGYVYYGDTPDFIKGKIYPYGNW CCEEEEECCCHHHHHCCCCCCCCCEEEECCCCCHHCEEEEECCCC >Mature Secondary Structure TRDKIIFIAPLLALLTGCNSVSSRYADLDKTEWGYKKLPYDEWKFLFIYPKALPALATQ CCCCEEHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHE ALMVDGEGYKTTYQYLDNTEPSQVSVGRWNDHLGATESYYNKGKALPLMLCFCWDSIIDK EEEECCCCCEEHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCC KSYETLIFFKKGTWEQMVTPYADNRWNETYYRSTMIIGLAPEGKVRVWLGDRGNPVVPQL CCCEEEEEEECCCHHHHCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCC DAKITTVSGDKMKMCKGVTKHPDGYVYYGDTPDFIKGKIYPYGNW CCEEEEECCCHHHHHCCCCCCCCCEEEECCCCCHHCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA