| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is 218696620
Identifier: 218696620
GI number: 218696620
Start: 3402739
End: 3403275
Strand: Reverse
Name: 218696620
Synonym: EC55989_3320
Alternate gene names: NA
Gene position: 3403275-3402739 (Counterclockwise)
Preceding gene: 218696621
Following gene: 218696619
Centisome position: 66.02
GC content: 51.02
Gene sequence:
>537_bases ATGGCGATTATCGCTGGTAAGGCTGGTTACGGTCTGATTATTGCGTTGTTTTCCCTGTCGTTATCAGGATGCGGTCTGAC GCAAAGAGTGGCAGACGGTACGGTATCTGCCACGAAATCCCTGTTTTACCGACAGATAAAAACACTTCACCTGGATATTC GTGCCAGGGAGGCCATTAACACCAGTGCTGCCGGTATTCCCCTGTCGGTTGTGGTGCGGATTTATCAGCTTAAAGACAAC CGGAGTTTTGACAGTGCGGATTATCAGGCGCTTTTTACAGGGGACAATGAAATTCTGGCAGGCGATATCATTGCACAGAA AGATGTATGGCTGCAGCCAGGTGGTTCAGTAGCCGTGGATATGCCTCTGGATGATGCGGCGAAATTTACCGGTGTGGCAG CAATGTTTCTGGAGCCTGACCAGAAGAAAAATACCTGGCGGGTGGTGCTGGGCCGGGATGAGCTTGAGCCGGACACGCCC CGTCTTATTGAAGTATCCGGTAACACCCTGACCCTGTTACCGGTGAAGGATAAATAG
Upstream 100 bases:
>100_bases CAGGCAAAGATAGCGACTTCAGCGGCACGCGTCATGACCATCAGTCTGGGGCGTTATCAGCGGGTTCAGGAACATTATCA ACGTAAGGAGACTCAGGAAA
Downstream 100 bases:
>100_bases TGATGCCGCGTCCTTCCCTTTATGAAATTCTCTATGGCAATTTCACTGGCGGGCTGGAGTTAAACCAGGTCGGTGAGGAA GAGCAGGTTATTCTTTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MAIIAGKAGYGLIIALFSLSLSGCGLTQRVADGTVSATKSLFYRQIKTLHLDIRAREAINTSAAGIPLSVVVRIYQLKDN RSFDSADYQALFTGDNEILAGDIIAQKDVWLQPGGSVAVDMPLDDAAKFTGVAAMFLEPDQKKNTWRVVLGRDELEPDTP RLIEVSGNTLTLLPVKDK
Sequences:
>Translated_178_residues MAIIAGKAGYGLIIALFSLSLSGCGLTQRVADGTVSATKSLFYRQIKTLHLDIRAREAINTSAAGIPLSVVVRIYQLKDN RSFDSADYQALFTGDNEILAGDIIAQKDVWLQPGGSVAVDMPLDDAAKFTGVAAMFLEPDQKKNTWRVVLGRDELEPDTP RLIEVSGNTLTLLPVKDK >Mature_177_residues AIIAGKAGYGLIIALFSLSLSGCGLTQRVADGTVSATKSLFYRQIKTLHLDIRAREAINTSAAGIPLSVVVRIYQLKDNR SFDSADYQALFTGDNEILAGDIIAQKDVWLQPGGSVAVDMPLDDAAKFTGVAAMFLEPDQKKNTWRVVLGRDELEPDTPR LIEVSGNTLTLLPVKDK
Specific function: Unknown
COG id: COG3521
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19251; Mature: 19120
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIAGKAGYGLIIALFSLSLSGCGLTQRVADGTVSATKSLFYRQIKTLHLDIRAREAIN CEEEECCCCCHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHEEEEEEEEHHHCC TSAAGIPLSVVVRIYQLKDNRSFDSADYQALFTGDNEILAGDIIAQKDVWLQPGGSVAVD CCCCCCCHHHEEEEEEECCCCCCCCCCEEEEEECCCCEEEECEEECCCEEECCCCCEEEE MPLDDAAKFTGVAAMFLEPDQKKNTWRVVLGRDELEPDTPRLIEVSGNTLTLLPVKDK CCCCCCHHHHCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCEEEEEEECCC >Mature Secondary Structure AIIAGKAGYGLIIALFSLSLSGCGLTQRVADGTVSATKSLFYRQIKTLHLDIRAREAIN EEEECCCCCHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHEEEEEEEEHHHCC TSAAGIPLSVVVRIYQLKDNRSFDSADYQALFTGDNEILAGDIIAQKDVWLQPGGSVAVD CCCCCCCHHHEEEEEEECCCCCCCCCCEEEEEECCCCEEEECEEECCCEEECCCCCEEEE MPLDDAAKFTGVAAMFLEPDQKKNTWRVVLGRDELEPDTPRLIEVSGNTLTLLPVKDK CCCCCCHHHHCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA