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The map label for this gene is 218696589

Identifier: 218696589

GI number: 218696589

Start: 3376123

End: 3377553

Strand: Reverse

Name: 218696589

Synonym: EC55989_3287

Alternate gene names: NA

Gene position: 3377553-3376123 (Counterclockwise)

Preceding gene: 218696590

Following gene: 218696588

Centisome position: 65.52

GC content: 36.76

Gene sequence:

>1431_bases
TTGTACGGGTATTACTGCATGCAAGAAGAAGAACAACTTGTTTATTGGTATTCAGGGCTCTATTTACAACCTCAGCACTT
TCAGTCAATTGACTTGCATCATGGCTTCATGCTTGCCAGAAGCAGGCAGTTATCACAACCCCATCATCAGGGGTACTATG
AATGTTGTATCAATGATGATCTTCTTAAGGAAGATACTGTCAGAGTTGAAAAAATAAAGGCTGTTTTATCTTCAGGGTAT
TATATCGAGTATCCGGGTAACTGTGTGGTACAGGATAAGTGCCTGACAAATCTCAAAGGTTCAGATCACGGTACCGTGGA
TTTGTGGCTTGCGCTTAAGAGATTCAATTCCGGTCATAAAAATGTCTCCAGTGTTAATGATAAACGAGGCTCTGCCAGAT
GGATAAGTTCAGATGATGAACGTAACATGCGTAATGTTTATCATGACAGTCAGGATGCCGATATTACAAGAATAAAATAT
GATATTCAGATTCTTACAGATGAGGAAAAAGATAATACTACAGACTATGAGTATTTACCCCTGACAAGGATCATATATGG
AAATAATTCATTGTGTATTGATGATGAGTGTTCATTTCCCGTGATGAGGTTATCTGCGAATCACAAACTTAGAAATAAGA
TCGCAGAGATCTATTCGGATATTAAGTTCTACAAAAATAGACTGGAGAAATACAGATATACAGAACGAACAGTGTCCGAT
GGACATCTTTATAACTTTTTAATTCTATGTGCTATTAATAGGACATTACCACTTCTTTCTTCATTCATTAATGAAGATGC
CATTCACCCATGGTTGTATTATATGGCATTATGTCAGTTTGCAGGGGAAATATCTACATTTCATAACTCTGGACTTTCAG
ATACTAGGATTGTCGAACTATCATACAATCATTATGAGCAGATCTCATGTTTCAGTGATCTGCAGTATTATATTAAGTTA
ATACTGGATGATTCATGTCGAGATAAGATTATTAGTGTTGAATTCAGAAAAATAACTACTGATACATTGATCTGTAATTT
CGATGAGTACGGTGCCGGAAGTAATTCAGATTACTATATTAAGTTAACCTCAGATACCTTCAGAAAGAATAAGCTGATTG
CATTGCCAGAGATTAAGATTGCTCCATCTGAACATATCGACATGATAATTCAGCATGCTCTTCCAGGAATCAAGTTTACA
GTGATGGATGCCGTTACATCTGATTTGCAGGTAAGAGAGAATACAATCTGGTTAAAGATAGATAAACATTCAGAATTATG
GACGTTAGCTCAGACTCAAAAAAGAGTTGCATTCTATTGGTCATGTAGTCCTGATGATTTACTTGTAGAGTTAGTATTAT
CGCAGGAAAAGTATGCCGTAAGCAGGCCTAAACAGGATAACGGTTCTTTCCATCCGGCGGTTGGCAGATAA

Upstream 100 bases:

>100_bases
TGTTGTTGAGGAAGGTTGGTGGAATAAATCATTACATGCATCACTCTTACCTCTTTCCAAAAAGATATCGATGGGTAAAG
AAAGTATCAGTATGAAATAA

Downstream 100 bases:

>100_bases
CGTTCATCCACTTTTGGGAGCTGAAATATGCTTTATCCAGACACTGGAAGACGTAGCCTAGTACAATATCTGTCAGGCTC
CACAGGAGAACCGGATGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Type VI Secretion System Protein EvpM; Type VI Secretion System Protein; Type VI Secretion System Core Protein; Type VI Secretion Protein VasE

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MYGYYCMQEEEQLVYWYSGLYLQPQHFQSIDLHHGFMLARSRQLSQPHHQGYYECCINDDLLKEDTVRVEKIKAVLSSGY
YIEYPGNCVVQDKCLTNLKGSDHGTVDLWLALKRFNSGHKNVSSVNDKRGSARWISSDDERNMRNVYHDSQDADITRIKY
DIQILTDEEKDNTTDYEYLPLTRIIYGNNSLCIDDECSFPVMRLSANHKLRNKIAEIYSDIKFYKNRLEKYRYTERTVSD
GHLYNFLILCAINRTLPLLSSFINEDAIHPWLYYMALCQFAGEISTFHNSGLSDTRIVELSYNHYEQISCFSDLQYYIKL
ILDDSCRDKIISVEFRKITTDTLICNFDEYGAGSNSDYYIKLTSDTFRKNKLIALPEIKIAPSEHIDMIIQHALPGIKFT
VMDAVTSDLQVRENTIWLKIDKHSELWTLAQTQKRVAFYWSCSPDDLLVELVLSQEKYAVSRPKQDNGSFHPAVGR

Sequences:

>Translated_476_residues
MYGYYCMQEEEQLVYWYSGLYLQPQHFQSIDLHHGFMLARSRQLSQPHHQGYYECCINDDLLKEDTVRVEKIKAVLSSGY
YIEYPGNCVVQDKCLTNLKGSDHGTVDLWLALKRFNSGHKNVSSVNDKRGSARWISSDDERNMRNVYHDSQDADITRIKY
DIQILTDEEKDNTTDYEYLPLTRIIYGNNSLCIDDECSFPVMRLSANHKLRNKIAEIYSDIKFYKNRLEKYRYTERTVSD
GHLYNFLILCAINRTLPLLSSFINEDAIHPWLYYMALCQFAGEISTFHNSGLSDTRIVELSYNHYEQISCFSDLQYYIKL
ILDDSCRDKIISVEFRKITTDTLICNFDEYGAGSNSDYYIKLTSDTFRKNKLIALPEIKIAPSEHIDMIIQHALPGIKFT
VMDAVTSDLQVRENTIWLKIDKHSELWTLAQTQKRVAFYWSCSPDDLLVELVLSQEKYAVSRPKQDNGSFHPAVGR
>Mature_476_residues
MYGYYCMQEEEQLVYWYSGLYLQPQHFQSIDLHHGFMLARSRQLSQPHHQGYYECCINDDLLKEDTVRVEKIKAVLSSGY
YIEYPGNCVVQDKCLTNLKGSDHGTVDLWLALKRFNSGHKNVSSVNDKRGSARWISSDDERNMRNVYHDSQDADITRIKY
DIQILTDEEKDNTTDYEYLPLTRIIYGNNSLCIDDECSFPVMRLSANHKLRNKIAEIYSDIKFYKNRLEKYRYTERTVSD
GHLYNFLILCAINRTLPLLSSFINEDAIHPWLYYMALCQFAGEISTFHNSGLSDTRIVELSYNHYEQISCFSDLQYYIKL
ILDDSCRDKIISVEFRKITTDTLICNFDEYGAGSNSDYYIKLTSDTFRKNKLIALPEIKIAPSEHIDMIIQHALPGIKFT
VMDAVTSDLQVRENTIWLKIDKHSELWTLAQTQKRVAFYWSCSPDDLLVELVLSQEKYAVSRPKQDNGSFHPAVGR

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55494; Mature: 55494

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGYYCMQEEEQLVYWYSGLYLQPQHFQSIDLHHGFMLARSRQLSQPHHQGYYECCINDD
CCCEEEECCCCEEEEEEECEEECCCCCCEECCCCCHHHHHHHHCCCCCCCCCEEEECCCC
LLKEDTVRVEKIKAVLSSGYYIEYPGNCVVQDKCLTNLKGSDHGTVDLWLALKRFNSGHK
CCCHHHHHHHHHHHHHHCCCEEECCCCEEEEHHHHHCCCCCCCCCEEEEEEEHHHCCCCC
NVSSVNDKRGSARWISSDDERNMRNVYHDSQDADITRIKYDIQILTDEEKDNTTDYEYLP
CHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEEC
LTRIIYGNNSLCIDDECSFPVMRLSANHKLRNKIAEIYSDIKFYKNRLEKYRYTERTVSD
EEEEEECCCCEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GHLYNFLILCAINRTLPLLSSFINEDAIHPWLYYMALCQFAGEISTFHNSGLSDTRIVEL
CHHHHHHEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
SYNHYEQISCFSDLQYYIKLILDDSCRDKIISVEFRKITTDTLICNFDEYGAGSNSDYYI
ECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECEEEECCHHHCCCCCCCEEE
KLTSDTFRKNKLIALPEIKIAPSEHIDMIIQHALPGIKFTVMDAVTSDLQVRENTIWLKI
EECCCCCCCCEEEECCCEEECCHHHHHHHHHHHCCCCEEEEHHHHHCCCEEECCEEEEEE
DKHSELWTLAQTQKRVAFYWSCSPDDLLVELVLSQEKYAVSRPKQDNGSFHPAVGR
ECCCCEEHHHHCCCEEEEEEECCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYGYYCMQEEEQLVYWYSGLYLQPQHFQSIDLHHGFMLARSRQLSQPHHQGYYECCINDD
CCCEEEECCCCEEEEEEECEEECCCCCCEECCCCCHHHHHHHHCCCCCCCCCEEEECCCC
LLKEDTVRVEKIKAVLSSGYYIEYPGNCVVQDKCLTNLKGSDHGTVDLWLALKRFNSGHK
CCCHHHHHHHHHHHHHHCCCEEECCCCEEEEHHHHHCCCCCCCCCEEEEEEEHHHCCCCC
NVSSVNDKRGSARWISSDDERNMRNVYHDSQDADITRIKYDIQILTDEEKDNTTDYEYLP
CHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEEC
LTRIIYGNNSLCIDDECSFPVMRLSANHKLRNKIAEIYSDIKFYKNRLEKYRYTERTVSD
EEEEEECCCCEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GHLYNFLILCAINRTLPLLSSFINEDAIHPWLYYMALCQFAGEISTFHNSGLSDTRIVEL
CHHHHHHEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
SYNHYEQISCFSDLQYYIKLILDDSCRDKIISVEFRKITTDTLICNFDEYGAGSNSDYYI
ECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECEEEECCHHHCCCCCCCEEE
KLTSDTFRKNKLIALPEIKIAPSEHIDMIIQHALPGIKFTVMDAVTSDLQVRENTIWLKI
EECCCCCCCCEEEECCCEEECCHHHHHHHHHHHCCCCEEEEHHHHHCCCEEECCEEEEEE
DKHSELWTLAQTQKRVAFYWSCSPDDLLVELVLSQEKYAVSRPKQDNGSFHPAVGR
ECCCCEEHHHHCCCEEEEEEECCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA