Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is hcaF
Identifier: 218696166
GI number: 218696166
Start: 2893743
End: 2894261
Strand: Direct
Name: hcaF
Synonym: EC55989_2825
Alternate gene names: 218696166
Gene position: 2893743-2894261 (Clockwise)
Preceding gene: 218696165
Following gene: 218696167
Centisome position: 56.14
GC content: 52.41
Gene sequence:
>519_bases ATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTG GAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGTTACACCATGCGCACCACAGTTAACGCGCAAACACGCG ACCGCCGCAAAGGCGTCCAGCCACCGACAACCTGGATTTTTAATGACACCAAAGACCAGCTGGAGCGGCGAATCGCCCGT CTGGAAACGGGCATGGCATGGGCAGAAGAGCCGCCGTCACGCACCCGCCACTTAATCAGCAACTGCCAGATAAGCGAAAC CGACATCCCAAACGTATTTGCTGTTCGGGTGAATTATCTGCTTTATCGGGCACAAAAAGAGCGCGATGAAACGTTCTATG TCGGGACTCGTTTTGACAAAGTTCGCCGTCTGGAAGATGACAACTGGCGCTTGCTGGAACGGGATATCGTCCTGGATCAA GCGGTAATCACTTCCCATAACCTGAGTGTACTGTTCTGA
Upstream 100 bases:
>100_bases CCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCT TACCAGCAGGAGGTGATGAA
Downstream 100 bases:
>100_bases TGAATCGAATTTATGCGTGTCCCGTTGCGGATGTGCCGGAGGGTGAGGCTCTCCGGATCGATACCTCGCCCGTCATCGCC CTGTTCAACGTTGGCGGCGA
Product: 3-phenylpropionate dioxygenase subunit beta
Products: NA
Alternate protein names: Digoxigenin subunit beta
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIAR LETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ AVITSHNLSVLF
Sequences:
>Translated_172_residues MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIAR LETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ AVITSHNLSVLF >Mature_171_residues SAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARL ETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQA VITSHNLSVLF
Specific function: Part of the multicomponent 3-phenylpropionate dioxygenase. Converts 3-phenylpropionic acid (PP) and cinnamic acid (CI) into 3-phenylpropionate-dihydrodiol (PP-dihydrodiol) and cinnamic acid-dihydrodiol (CI-dihydrodiol), respectively
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family
Homologues:
Organism=Escherichia coli, GI1788889, Length=172, Percent_Identity=100, Blast_Score=353, Evalue=2e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HCAF_ECO24 (A7ZPY2)
Other databases:
- EMBL: CP000800 - RefSeq: YP_001463861.1 - ProteinModelPortal: A7ZPY2 - SMR: A7ZPY2 - STRING: A7ZPY2 - EnsemblBacteria: EBESCT00000020281 - GeneID: 5589475 - GenomeReviews: CP000800_GR - KEGG: ecw:EcE24377A_2824 - eggNOG: COG5517 - GeneTree: EBGT00050000011518 - HOGENOM: HBG582498 - OMA: DIFAGER - ProtClustDB: PRK10069 - BioCyc: ECOL331111:ECE24377A_2824-MONOMER - HAMAP: MF_01649 - InterPro: IPR000391
Pfam domain/function: PF00866 Ring_hydroxyl_B
EC number: =1.14.12.19
Molecular weight: Translated: 20579; Mature: 20448
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQ CCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC PPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYL CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF HHHHHHCCCCEEEEECHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCEEEEC >Mature Secondary Structure SAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQ CCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC PPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYL CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF HHHHHHCCCCEEEEECHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA