Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is suhB
Identifier: 218696160
GI number: 218696160
Start: 2886795
End: 2887598
Strand: Direct
Name: suhB
Synonym: EC55989_2818
Alternate gene names: 218696160
Gene position: 2886795-2887598 (Clockwise)
Preceding gene: 218696148
Following gene: 218696161
Centisome position: 56.0
GC content: 53.98
Gene sequence:
>804_bases ATGCATCCGATGCTGAACATCGCCGTGCGCGCAGCGCGCAAGGCGGGTAATTTAATTGCCAAAAACTATGAAACCCCGGA CGCTGTAGAAGCGAGCCAGAAAGGCAGTAACGATTTCGTGACCAACGTAGATAAAGCTGCCGAAGCGGTGATTATCGACA CGATTCGTAAATCTTACCCACAGCACACCATCATCACCGAAGAAAGCGGTGAACTTGAAGGTACTGATCAGGATGTTCAA TGGGTTATCGATCCACTGGATGGTACTACCAACTTTATCAAACGTCTGCCGCACTTCGCGGTATCTATCGCCGTTCGTAT CAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCAC AGCTGAACGGCTACCGTCTGCGCGGTAGCACCGCTCGCGATCTCGACGGTACCATTCTGGCGACCGGCTTCCCGTTCAAA GCAAAACAGTACGCCACTACCTACATCAACATCGTCGGCAAACTGTTCAACGAATGTGCAGACTTCCGTCGTACCGGTTC TGCGGCGCTGGATCTGGCTTACGTCGCTGCGGGTCGTGTTGACGGTTTCTTTGAAATCGGTCTGCGTCCGTGGGATTTCG CGGCAGGCGAGCTGCTGGTTCGTGAAGCGGGCGGCATCGTCAGCGACTTCACCGGTGGTCATAACTATATGCTGACCGGT AACATCGTTGCTGGTAACCCACGTGTTGTGAAAGCCATGCTGGCGAACATGCGTGACGAGTTAAGCGACGCTCTGAAGCG TTAA
Upstream 100 bases:
>100_bases GATTATTCACGCATCTTATCATAAAACGAAGACAGATGCCGATCTCGCTGCTATACTCTGCGCCGTTTTCCCGTTCTTTA ACATCCAGTGAGAGAGACCG
Downstream 100 bases:
>100_bases TGACTCAGGCGGGTGATGTCACTCACCCGCCCTCGCCTTTCAGGCGCTATTCTGAAATACTTCCTCACCGCTTTACTTTC TTTCGTCACTCTCCCACCAT
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQ WVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK AKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTG NIVAGNPRVVKAMLANMRDELSDALKR
Sequences:
>Translated_267_residues MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQ WVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK AKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTG NIVAGNPRVVKAMLANMRDELSDALKR >Mature_267_residues MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQ WVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK AKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTG NIVAGNPRVVKAMLANMRDELSDALKR
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family
Homologues:
Organism=Homo sapiens, GI5031789, Length=257, Percent_Identity=32.6848249027237, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI221625487, Length=257, Percent_Identity=32.6848249027237, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI7657236, Length=254, Percent_Identity=34.251968503937, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI221625507, Length=142, Percent_Identity=36.6197183098592, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1788882, Length=267, Percent_Identity=100, Blast_Score=548, Evalue=1e-157, Organism=Escherichia coli, GI1790659, Length=131, Percent_Identity=35.8778625954198, Blast_Score=80, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193202572, Length=239, Percent_Identity=33.4728033472803, Blast_Score=154, Evalue=3e-38, Organism=Caenorhabditis elegans, GI193202570, Length=239, Percent_Identity=32.6359832635983, Blast_Score=149, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6320493, Length=203, Percent_Identity=33.4975369458128, Blast_Score=111, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6321836, Length=206, Percent_Identity=33.0097087378641, Blast_Score=110, Evalue=2e-25, Organism=Drosophila melanogaster, GI21357329, Length=245, Percent_Identity=34.6938775510204, Blast_Score=153, Evalue=1e-37, Organism=Drosophila melanogaster, GI24664922, Length=270, Percent_Identity=31.1111111111111, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI24664926, Length=237, Percent_Identity=32.0675105485232, Blast_Score=140, Evalue=8e-34, Organism=Drosophila melanogaster, GI21357303, Length=237, Percent_Identity=35.0210970464135, Blast_Score=140, Evalue=8e-34, Organism=Drosophila melanogaster, GI21357957, Length=280, Percent_Identity=32.1428571428571, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI24664918, Length=257, Percent_Identity=33.0739299610895, Blast_Score=130, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SUHB_ECO57 (P0ADG6)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: G91053 - RefSeq: NP_311426.1 - ProteinModelPortal: P0ADG6 - SMR: P0ADG6 - EnsemblBacteria: EBESCT00000028439 - EnsemblBacteria: EBESCT00000056077 - GeneID: 915157 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ecs:ECs3399 - GeneTree: EBGT00050000010909 - HOGENOM: HBG730251 - OMA: TGFPFKQ - ProtClustDB: PRK10757 - BioCyc: ECOL83334:ECS3399-MONOMER - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 - PANTHER: PTHR20854 - PRINTS: PR00377 - PRINTS: PR01959
Pfam domain/function: PF00459 Inositol_P
EC number: =3.1.3.25
Molecular weight: Translated: 29172; Mature: 29172
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00629 IMP_1; PS00630 IMP_2
Important sites: BINDING 67-67 BINDING 183-183 BINDING 212-212
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYP CCCHHHHHHHHHHHHCCEEECCCCCCCHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHCCC QHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPM CCEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCEEEEEEEEECCCEEEEEEECCC RNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECA CCCEEEECCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH DFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTG HHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCEEECCCCCCCEEEEC NIVAGNPRVVKAMLANMRDELSDALKR CEEECCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYP CCCHHHHHHHHHHHHCCEEECCCCCCCHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHCCC QHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPM CCEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCEEEEEEEEECCCEEEEEEECCC RNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECA CCCEEEECCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH DFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTG HHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCEEECCCCCCCEEEEC NIVAGNPRVVKAMLANMRDELSDALKR CEEECCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796