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The map label for this gene is yfeC

Identifier: 218696037

GI number: 218696037

Start: 2749496

End: 2749840

Strand: Direct

Name: yfeC

Synonym: EC55989_2691

Alternate gene names: 218696037

Gene position: 2749496-2749840 (Clockwise)

Preceding gene: 218696035

Following gene: 218696038

Centisome position: 53.34

GC content: 50.14

Gene sequence:

>345_bases
ATGACACCAGATGAACTTGCCAGACTGACCGGCTATAGCCGCCAGACCATTAATAAATGGGTACGCAAGGAAGGCTGGAC
AACGTCACCAAAACCTGGCGTCCAGGGTGGCAAAGCCCGACTGGTTCACGTCAATGAACAGGTTCGTGAATATATTCGCA
ATGCTGAACGTCCAGAAGGTCAGGGAGAAGCGCCTGCCCTTTCTGGTGATGCGCCGCTTGAAGTATTGCTGGTGACACTG
GCGAAAGAGATGACGCCAGTTGAACAAAAACAGTTTACATCCTTGCTTCTGCGGGAAGGGATTATCGGATTGTTACAACG
CTTAGGGATTCGCGATAGCAAATAA

Upstream 100 bases:

>100_bases
CAGTAGTTATTCATGTCACGGTTTCCTGTAAAGTGGTGTTATAAAATGAACTACTAATAGACCCACATACATTCAGGGAA
TTGTTATGTTCAAGGAGAGG

Downstream 100 bases:

>100_bases
TATGAAAAGATTACGCAACAAAATGACCACCGAAGAACTGGCTGAATGCCTCGGTGTGGCTAAACAAACTGTTAACCGTT
GGATCAGAGAAAAAGGCTGG

Product: putative nucleic acid-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTL
AKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK

Sequences:

>Translated_114_residues
MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTL
AKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK
>Mature_113_residues
TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLA
KEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiI and P.aeruginosa rluD

Homologues:

Organism=Escherichia coli, GI87082097, Length=114, Percent_Identity=100, Blast_Score=230, Evalue=2e-62,
Organism=Escherichia coli, GI226510963, Length=123, Percent_Identity=39.0243902439024, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): YFEC_ECOL6 (P0AD38)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_754816.1
- ProteinModelPortal:   P0AD38
- SMR:   P0AD38
- EnsemblBacteria:   EBESCT00000044890
- GeneID:   1038539
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c2934
- GeneTree:   EBGT00050000010071
- HOGENOM:   HBG511116
- OMA:   QRVAETP
- ProtClustDB:   CLSK880384
- InterPro:   IPR009061
- InterPro:   IPR010749
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- ProDom:   PD060594

Pfam domain/function: PF07037 DUF1323; SSF46955 Putativ_DNA_bind

EC number: NA

Molecular weight: Translated: 12720; Mature: 12589

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG
CCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCC
QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG
CHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCC
QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157