| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yeiJ
Identifier: 218695775
GI number: 218695775
Start: 2468297
End: 2469547
Strand: Reverse
Name: yeiJ
Synonym: EC55989_2414
Alternate gene names: 218695775
Gene position: 2469547-2468297 (Counterclockwise)
Preceding gene: 218695776
Following gene: 218695771
Centisome position: 47.91
GC content: 50.6
Gene sequence:
>1251_bases ATGGATGTCATGAGAAGTGTTCTGGGAATGGTGGTATTGCTGGCAATTGCATTTTTGCTGTCAGTAAACAAGAAGAAGAT CAGCCTGCGTACCGTTGGCGCGGCGTTAGTGTTACAGGTTGTGATTGGCGGCATTATGCTTTGGTTACCGCCAGGGCGTT GGGTCGCTGAAAAAGTCGCTTTTGGCGTGCATAAAGTGATGGCGTACAGCGACGCGGGTAGCGCATTTATCTTCGGTTCG CTGGTCGGGCCGAAAATGGACACGCTGTTTGATGGCGCAGGATTTATCTTTGGTTTCAGAGTATTACCGGCAATTATCTT CGTTACAGCACTGGTGAGTATTCTCTACTACATCGGTGTGATGGGGATTTTAATTCGCATTCTCGGCGGTATCTTCCAGA AAGCGTTAAATATCAGCAAGATCGAGTCATTCGTCGCGGTCACCACCATTTTCCTCGGGCAAAACGAAATTCCGGCGATC GTCAAACCCTTTATCGATCGTCTGAATCGCAATGAATTATTTACAGCGATTTGTAGTGGCATGGCCTCGATTGCTGGTTC GACAATGATTGGTTACGCCGCCCTGGGCGTACCTGTGGAATATTTGCTGGCGGCATCGTTAATGGCGATCCCTGGCGGGA TCTTGTTTGCCCGCCTGTTAAGCCCGGCTACGGAATCTTCGCAGGTTTCCTTTAATAACCTCTCTTTCACCGAAACACCG CCAAAAAGCATTATTGAAGCCGCTGCGACAGGGGCAATGACCGGGCTGAAAATCGCCGCCGGTGTAGCGACAGTTGTTAT GGCATTTGTCGCCATCATTGCGTTAATTAATGGTATTATCGGCGGCGTTGGCGGCTGGTTTGGTTTTGCACATGCCTCGC TGGAGTCCATTTTAGGTTACCTGTTGGCCCCATTGGCGTGGGTGATGGGGGTTGACTGGAGTGATGCAAATCTTGCCGGG AGTTTGATTGGGCAGAAGCTGGCGATCAATGAATTTGTCGCTTATCTCAATTTCTCGCCATATCTGCAAACGGGTGGCAC TCTGGATGCTAAAACCGTGGCGATTATTTCTTTCGCGTTGTGCGGTTTCGCTAACTTTGGTTCTATCGGGGTGGTGGTGG GGGCGTTTTCTGCGGTTGCGCCACACCGTGCGCCGGAAATCGCCCAACTTGGTTTACGCGCGCTGGCGGCGGCGACACTT TCTAACCTGATGAGTGCTACTATTGCAGGATTCTTTATTGGTTTAGCGTAG
Upstream 100 bases:
>100_bases AGCGTTGATAACAAGCCGGGCCGATAGCGCAAGATGCAGGCCCGGCTATTTCTGATGGGCAGAAAGCCGTCGCCCAATAT GACATGAAGAGATAATCACT
Downstream 100 bases:
>100_bases TGCTCAATTTATGAGCCGGATAAGATGCGGTCAAGCGTCGAATCCGGCAACATTGTTACACCATTGGCACTAATGAAAGC GCGTTATCGGCAGACAGGGT
Product: putative sodium/proton nucleoside transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVAFGVHKVMAYSDAGSAFIFGS LVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI VKPFIDRLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARLLSPATESSQVSFNNLSFTETP PKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFAHASLESILGYLLAPLAWVMGVDWSDANLAG SLIGQKLAINEFVAYLNFSPYLQTGGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATL SNLMSATIAGFFIGLA
Sequences:
>Translated_416_residues MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVAFGVHKVMAYSDAGSAFIFGS LVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI VKPFIDRLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARLLSPATESSQVSFNNLSFTETP PKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFAHASLESILGYLLAPLAWVMGVDWSDANLAG SLIGQKLAINEFVAYLNFSPYLQTGGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATL SNLMSATIAGFFIGLA >Mature_416_residues MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVAFGVHKVMAYSDAGSAFIFGS LVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI VKPFIDRLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARLLSPATESSQVSFNNLSFTETP PKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFAHASLESILGYLLAPLAWVMGVDWSDANLAG SLIGQKLAINEFVAYLNFSPYLQTGGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATL SNLMSATIAGFFIGLA
Specific function: Nucleoside transporter [H]
COG id: COG1972
COG function: function code F; Nucleoside permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]
Homologues:
Organism=Homo sapiens, GI11545853, Length=415, Percent_Identity=33.7349397590361, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI42542381, Length=422, Percent_Identity=31.042654028436, Blast_Score=221, Evalue=9e-58, Organism=Homo sapiens, GI227116277, Length=419, Percent_Identity=30.3102625298329, Blast_Score=207, Evalue=1e-53, Organism=Escherichia coli, GI1788485, Length=416, Percent_Identity=99.2788461538462, Blast_Score=806, Evalue=0.0, Organism=Escherichia coli, GI1788488, Length=416, Percent_Identity=88.9423076923077, Blast_Score=704, Evalue=0.0, Organism=Escherichia coli, GI1788737, Length=414, Percent_Identity=31.8840579710145, Blast_Score=190, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17560276, Length=396, Percent_Identity=29.2929292929293, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71991794, Length=399, Percent_Identity=31.8295739348371, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI25146537, Length=202, Percent_Identity=30.6930693069307, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI45552519, Length=408, Percent_Identity=31.8627450980392, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI45552517, Length=408, Percent_Identity=31.8627450980392, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI19921868, Length=408, Percent_Identity=31.8627450980392, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI281360430, Length=407, Percent_Identity=33.1695331695332, Blast_Score=207, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008276 - InterPro: IPR018270 - InterPro: IPR011642 - InterPro: IPR011657 - InterPro: IPR002668 [H]
Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]
EC number: NA
Molecular weight: Translated: 43308; Mature: 43308
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVA CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH FGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGV HHHHHHHHCCCCCCEEEEHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRLNRNELFTAICSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHH MASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARLLSPATESSQVSFNNLSFTETP HHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCCCCC PKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFAHASLESILGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVAYLNFSPYLQTGGTLDAKTVAIISFAL HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHH CGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA HCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVA CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH FGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGV HHHHHHHHCCCCCCEEEEHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRLNRNELFTAICSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHH MASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARLLSPATESSQVSFNNLSFTETP HHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCCCCC PKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFAHASLESILGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVAYLNFSPYLQTGGTLDAKTVAIISFAL HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHH CGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA HCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]