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The map label for this gene is yedO

Identifier: 218695526

GI number: 218695526

Start: 2184419

End: 2185405

Strand: Reverse

Name: yedO

Synonym: EC55989_2140

Alternate gene names: 218695526

Gene position: 2185405-2184419 (Counterclockwise)

Preceding gene: 218695527

Following gene: 218695525

Centisome position: 42.4

GC content: 53.9

Gene sequence:

>987_bases
ATGCCACTGCATAATTTAACCCGTTTTCCACGGCTGGAGTTTATCGGCGCGCCAACTCCGCTCGAATATCTGCCGCGCTT
TTCTGATTATCTTGGACGGGAAATTTTCATCAAACGGGATGACGTCACCCCCATGGCAATGGGCGGCAATAAATTACGTA
AGCTGGAATTTCTCGCAGCAGATGCTCTGCGCGAAGGTGCCGATACGCTGATTACTGCCGGGGCGATCCAGTCTAACCAT
GTGCGCCAGACTGCCGCAGTTGCGGCGAAACTCGGTCTGCACTGCGTGGCGCTGCTGGAAAATCCTATTGGCACAACCGC
AGAAAACTATTTAACCAACGGCAATCGTTTGTTGCTGGATCTGTTCAATACCCAGATTGAAATGTGTGACGCACTGACCG
ATCCCAATGCCCAACTGGAAGAGCTGGCGACGCGAGTCGAAGCACAAGGCTTTCGCCCGTATGTCATTCCGGTTGGCGGT
TCTAATGCTCTGGGCGCGCTGGGTTATGTGGAGAGTGCGCTGGAAATCGCGCAACAGTGTGAAGGGGCGGTTAATATTTC
GTCGGTGGTGGTCGCATCGGGCAGTGCCGGAACTCACGCCGGACTGGCTGTTGGGCTGGAACACCTTATGCCTGAAAGCG
AACTGATTGGCGTTACCGTGTCGCGTTCCGTTGCCGATCAATTGCCGAAAGTGGTTAACCTACAACAGGCGATTGCGAAA
GAACTGGAGCTGACCGCATCAGCGGAAATTTTACTCTGGGATGACTATTTTGCACCTGGCTACGGCGTGCCGAACGATGA
AGGCATGGAAGCAGTGAAATTGCTGGCGCGGCTGGAAGGCATTCTGCTTGATCCTGTGTATACCGGAAAAGCGATGGCGG
GGCTGATTGACGGTATCAGTCAGAAACGCTTCAAAGATGAAGGGCCGATTCTGTTTATTCATACCGGCGGCGCGCCTGCG
CTGTTCGCCTATCATCCCCACGTTTAG

Upstream 100 bases:

>100_bases
CATAATGACAAAAAAGGGCGCTTTCACTAGCGCCTTTTTTATTTACGCGTTTTCAGCGTGCATAATAAGAAAATCACAAC
AACACACATCGGAGGCTGTT

Downstream 100 bases:

>100_bases
CTCCGGAAACGCTCATGCAAGAAAGTATACAACTGGTTATTGATTCCTTGCCGTTCCTGCTGAAAGGGGCTGGGTATACG
CTGCAACTCAGTATCGGCGG

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNH
VRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGG
SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK
ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPA
LFAYHPHV

Sequences:

>Translated_328_residues
MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNH
VRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGG
SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK
ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPA
LFAYHPHV
>Mature_327_residues
PLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHV
RQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGS
NALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAKE
LELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPAL
FAYHPHV

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=328, Percent_Identity=100, Blast_Score=666, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 35154; Mature: 35023

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAA
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEECCCCHHHHHHHHHH
DALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLD
HHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEE
LFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQC
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHC
EGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK
CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH
ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGIS
HHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHH
QKRFKDEGPILFIHTGGAPALFAYHPHV
HHHCCCCCCEEEEECCCCCEEEEECCCC
>Mature Secondary Structure 
PLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAA
CCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEECCCCHHHHHHHHHH
DALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLD
HHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEE
LFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQC
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHC
EGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK
CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH
ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGIS
HHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHH
QKRFKDEGPILFIHTGGAPALFAYHPHV
HHHCCCCCCEEEEECCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA