Click here to switch to the map view.

The map label for this gene is W

Identifier: 218695505

GI number: 218695505

Start: 2164030

End: 2164380

Strand: Direct

Name: W

Synonym: EC55989_2118

Alternate gene names: NA

Gene position: 2164030-2164380 (Clockwise)

Preceding gene: 218695504

Following gene: 218695506

Centisome position: 41.98

GC content: 56.13

Gene sequence:

>351_bases
GTGACAACCCGCTACACAGGAATGAATCCGGACGGGACGGGAAACCTGAACGATATGGAGCACCTGAAACAGTCAGTCAG
GGATATCCTGACCACCCCGCTGGCAAGCCGGGTTATGCGACGGGAATATGGCAGCCTTGTGCCTGATTTGATTGACGAAC
CCATGAATAACACCACGCGTCTGCAATGCATGAGTGCTGCCGTGATTGCGCTGACACGATGGGAACCCCGCATTGCCCTG
GATGCCATCGACGTTGTCTGGAAAGCGGGAGGCCGCGCCGGGGTGACGCTGTCGGGCACTGTCATGCAGACCATGCAGAA
TGTTGAATTAACCATCACGCTAAGGGAGTAA

Upstream 100 bases:

>100_bases
TCACGCACAGCGGCGGCAACTTCACCTCAAACGGCATTACCGTGCATACGCATAAACACGGTGGCGTGAAAGGTGGCAGC
GATTCGACAGGAGGCCCGCA

Downstream 100 bases:

>100_bases
ATCATGCCCGCCGTTGACCTTTCACAGTTACCGGACCCCGCCATCATCGCGGAGCCTGACTTTGAGGCAATTCTGGCTGA
CACAAAGGCCATGATAATTG

Product: Baseplate assembly protein W

Products: NA

Alternate protein names: Baseplate Assembly Protein W; Phage Baseplate Assembly Protein; GPW/Gp; Baseplate Assembly Protein GpW; Pyocin R2_PP Baseplate Protein; Bacteriophage P2 Baseplate Assembly Protein GPW; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein W; Phage Baseplate Assembly Protein W; Phage P2 Baseplate Assembly GpW-Like Protein; Phage Baseplate Assembly; GpW/GP25 Family Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly W Protein; Phage-Related Baseplate Protein; Phage Protein Gp; Baseplate Assembly Protein; Prophage Baseplate Protein; Baseplate Assembly Protein W Prophage; Prophage LambdaW1 Baseplate Assembly Protein W

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTTRYTGMNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYGSLVPDLIDEPMNNTTRLQCMSAAVIALTRWEPRIAL
DAIDVVWKAGGRAGVTLSGTVMQTMQNVELTITLRE

Sequences:

>Translated_116_residues
MTTRYTGMNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYGSLVPDLIDEPMNNTTRLQCMSAAVIALTRWEPRIAL
DAIDVVWKAGGRAGVTLSGTVMQTMQNVELTITLRE
>Mature_115_residues
TTRYTGMNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYGSLVPDLIDEPMNNTTRLQCMSAAVIALTRWEPRIALD
AIDVVWKAGGRAGVTLSGTVMQTMQNVELTITLRE

Specific function: Unknown

COG id: COG3628

COG function: function code R; Phage baseplate assembly protein W

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12893; Mature: 12762

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRYTGMNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYGSLVPDLIDEPMNNTTR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHH
LQCMSAAVIALTRWEPRIALDAIDVVWKAGGRAGVTLSGTVMQTMQNVELTITLRE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHCCCEEEEEECC
>Mature Secondary Structure 
TTRYTGMNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYGSLVPDLIDEPMNNTTR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHH
LQCMSAAVIALTRWEPRIALDAIDVVWKAGGRAGVTLSGTVMQTMQNVELTITLRE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA