Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is yecJ
Identifier: 218695466
GI number: 218695466
Start: 2137788
End: 2138039
Strand: Reverse
Name: yecJ
Synonym: EC55989_2079
Alternate gene names: 218695466
Gene position: 2138039-2137788 (Counterclockwise)
Preceding gene: 218695470
Following gene: 218695464
Centisome position: 41.48
GC content: 48.81
Gene sequence:
>252_bases ATGTCCCAGCCGCTGAATGCCGATCAGGAACTGGTTTCTGATGTGGTTGCTTGCCAGTTGGTTATCAAACAAATTCTGGA TGTTCTCGATGTAATCGCGCCCGTTGAAGTTCGTGAAAAAATGTCCAGTCAGCTGAAGAATATCGACTTTACTAACCATC CCGCCGCCGCAGACCCGGTCACCATGCGGGCAATCCAAAAAGCCATCGCGCTTATTGAACTCAAGTTTACCCCACAGGGT GAATCCCATTAA
Upstream 100 bases:
>100_bases CGGCAGGTTTTTTTGTGTCCTGATGACGGTGGATGTGACTATCGCTGAAGATGTGAAGCCGCTACTATAACGGCTTTCAA AATGCTATCAGGAGTTTACG
Downstream 100 bases:
>100_bases AAAAACCGCTGCTTCAAACAGATGAGGCAGCGGTTTCTCAAAACCTTCATCGGCGCAATGCATTAGCGCCGATGATGATC AATGCAGCTGGTGTGACACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQLKNIDFTNHPAAADPVTMRAIQKAIALIELKFTPQG ESH
Sequences:
>Translated_83_residues MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQLKNIDFTNHPAAADPVTMRAIQKAIALIELKFTPQG ESH >Mature_82_residues SQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQLKNIDFTNHPAAADPVTMRAIQKAIALIELKFTPQGE SH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081998, Length=83, Percent_Identity=100, Blast_Score=167, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YECJ_ECOL6 (P0AD11)
Other databases:
- EMBL: AE014075 - RefSeq: NP_754208.1 - ProteinModelPortal: P0AD11 - EnsemblBacteria: EBESCT00000044676 - GeneID: 1036925 - GenomeReviews: AE014075_GR - KEGG: ecc:c2316 - GeneTree: EBGT00050000009151 - HOGENOM: HBG416026 - OMA: NIDFTSH - ProtClustDB: CLSK888948 - InterPro: IPR020262 - ProDom: PD060536
Pfam domain/function: PF10964 DUF2766
EC number: NA
Molecular weight: Translated: 9123; Mature: 8991
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQLKNIDFTNHPAAADPV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHH TMRAIQKAIALIELKFTPQGESH HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQLKNIDFTNHPAAADPV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHH TMRAIQKAIALIELKFTPQGESH HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157