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The map label for this gene is ydfD

Identifier: 218694775

GI number: 218694775

Start: 1412265

End: 1412456

Strand: Reverse

Name: ydfD

Synonym: EC55989_1358

Alternate gene names: 218694775

Gene position: 1412456-1412265 (Counterclockwise)

Preceding gene: 218694776

Following gene: 218694774

Centisome position: 27.4

GC content: 43.75

Gene sequence:

>192_bases
ATGAATACAGCATTTGCACTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAG
GACAATGCAGGAGTGTGTGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTCGATAAAGTTATTCACC
AGGATAATAACGAAATCCCGGCAGGTCTTTAA

Upstream 100 bases:

>100_bases
ATGCCATTAACAAGAGAAAACACGAACGGGAGCTATTAAATAAAATATGCATTCTTTCAATGCTGGCCCGTTTACGTCCG
ATACAAAAAGGATGCTGGCA

Downstream 100 bases:

>100_bases
AACAGTTCCGTAATAAATATCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCACCCTTAAATCTGTAATG
AGGTAAAACAAAATGAGTAA

Product: conserved hypothetical protein; Qin prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MNTAFALVLTVFLVSGEPVDIAVSVHRTMQECVTAATEQKIPGNCYPVDKVIHQDNNEIPAGL

Sequences:

>Translated_63_residues
MNTAFALVLTVFLVSGEPVDIAVSVHRTMQECVTAATEQKIPGNCYPVDKVIHQDNNEIPAGL
>Mature_63_residues
MNTAFALVLTVFLVSGEPVDIAVSVHRTMQECVTAATEQKIPGNCYPVDKVIHQDNNEIPAGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787858, Length=63, Percent_Identity=93.6507936507936, Blast_Score=124, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009954 [H]

Pfam domain/function: PF07358 DUF1482 [H]

EC number: NA

Molecular weight: Translated: 6797; Mature: 6797

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAFALVLTVFLVSGEPVDIAVSVHRTMQECVTAATEQKIPGNCYPVDKVIHQDNNEIP
CCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
AGL
CCC
>Mature Secondary Structure
MNTAFALVLTVFLVSGEPVDIAVSVHRTMQECVTAATEQKIPGNCYPVDKVIHQDNNEIP
CCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
AGL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3041373; 9097039; 9278503 [H]