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The map label for this gene is yciI

Identifier: 218694766

GI number: 218694766

Start: 1404145

End: 1404441

Strand: Reverse

Name: yciI

Synonym: EC55989_1349

Alternate gene names: 218694766

Gene position: 1404441-1404145 (Counterclockwise)

Preceding gene: 218694768

Following gene: 218694765

Centisome position: 27.24

GC content: 48.82

Gene sequence:

>297_bases
GTGTTGTATGTTATTTACGCTCAAGACAAAGCTGATAGCCTCGAAAAACGCCTTTCCGTTCGTCCGGCACATTTAGCACG
TTTACAGTTACTGCATGATGAAGGTCGTTTGTTGACAGCTGGTCCAATGCCAGCGGTAGACAGTAACGATCCAGGGGCTG
CGGGATTTACTGGCTCAACCGTTATTGCTGAATTTGAATCGCTGGAAGCAGCTCAGGCCTGGGCCGATGCTGACCCGTAC
GTAGCGGCAGGAGTCTATGAACACGTTTCAGTGAAACCATTTAAGAAAGTGTTCTGA

Upstream 100 bases:

>100_bases
ATTTATGCATGGTCTTAACAAAGACATCATCTTTCCGTTGCAGATCTTCGCCCTTTCAAATAACGTACTTTACAACTTTC
CCGAACAAGGAGTTGTGCCC

Downstream 100 bases:

>100_bases
ATAGAGATTCAATATTTAAGGGCACGGTTTTTGCAACCGTGTTCTTGTTTGGCCTTTCCTTATAGCCGGTCAGTGCATTC
ACTACCACAAGCAGATAATA

Product: YciI-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMPAVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPY
VAAGVYEHVSVKPFKKVF

Sequences:

>Translated_98_residues
MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMPAVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPY
VAAGVYEHVSVKPFKKVF
>Mature_98_residues
MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMPAVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPY
VAAGVYEHVSVKPFKKVF

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yciI family

Homologues:

Organism=Escherichia coli, GI87081861, Length=98, Percent_Identity=100, Blast_Score=200, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCII_ECOL6 (P0AB56)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_753621.2
- ProteinModelPortal:   P0AB56
- SMR:   P0AB56
- EnsemblBacteria:   EBESCT00000044537
- GeneID:   1035498
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c1716
- GeneTree:   EBGT00050000009099
- HOGENOM:   HBG712516
- OMA:   MWYMISS
- ProtClustDB:   PRK11370
- InterPro:   IPR011008
- InterPro:   IPR005545

Pfam domain/function: PF03795 YCII; SSF54909 Dimer_A_B_barrel

EC number: NA

Molecular weight: Translated: 10602; Mature: 10602

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMPAVDSNDPGAAGFTGST
CEEEEEECCCHHHHHHHHCCCCHHHHHHHEECCCCCEEECCCCCCCCCCCCCCCCCCCCH
VIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF
HHHHHHHHHHHHHHCCCCCCEECCHHCCCCCCCHHHCC
>Mature Secondary Structure
MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMPAVDSNDPGAAGFTGST
CEEEEEECCCHHHHHHHHCCCCHHHHHHHEECCCCCEEECCCCCCCCCCCCCCCCCCCCH
VIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF
HHHHHHHHHHHHHHCCCCCCEECCHHCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157