| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is cvrA
Identifier: 218694705
GI number: 218694705
Start: 1336169
End: 1337905
Strand: Reverse
Name: cvrA
Synonym: EC55989_1287
Alternate gene names: 218694705
Gene position: 1337905-1336169 (Counterclockwise)
Preceding gene: 218694706
Following gene: 218694702
Centisome position: 25.95
GC content: 52.62
Gene sequence:
>1737_bases TTGGATGCCACAACAATAATTAGCCTTTTCATCTTAGGATCCATCCTTGTCACCAGCAGTATATTACTTAGTTCATTTTC TTCCCGTCTTGGCATTCCTATTCTGGTTATTTTTCTGGCGATCGGCATGCTGGCAGGAGTCGATGGCGTCGGCGGTATCC CGTTTGATAATTACCCCTTCGCCTACATGGTAAGTAACCTGGCACTGGCGATTATTTTGCTCGACGGCGGGATGCGCACT CAGGCCAGTTCCTTTCGTGTGGCGTTAGGACCGGCACTGTCGCTGGCGACGCTGGGCGTGCTTATCACCTCTGGTTTAAC CGGCATGATGGCGGCGTGGCTGTTTAATCTTGATTTGATTGAAGGCTTATTAATCGGCGCTATCGTCGGCTCTACCGATG CTGCAGCGGTCTTTTCTCTGCTGGGTGGTAAGGGGCTTAACGAACGTGTTGGCTCGACGCTGGAAATTGAATCCGGCAGT AATGATCCAATGGCGGTCTTTCTGACGATTACCCTGATTGCGATGATCCAGCAACATGAAAGCAGTGTCAGTTGGATGTT CGTGGTCGATATTCTGCAGCAATTTGGCCTCGGGATTGTCATCGGACTTGGCGGTGGTTATTTACTGCTGCAAATGATTA ATCGCATCGCCCTGCCTGCCGGATTATATCCATTGCTGGCATTAAGCGGCGGTATTTTAATTTTTGCTTTAACCACGGCG CTGGAAGGCAGCGGTATTCTGGCTGTTTATCTGTGCGGTTTTCTGCTGGGTAATCGGCCGATTCGCAACCGCTACGGCAT CCTGCAAAATTTCGACGGCCTCGCCTGGCTGGCGCAAATCGCCATGTTCCTGGTGCTGGGGCTATTGGTTAACCCAAGCG ATCTGCTGCCTATTGCCATTCCGGCGCTCATTTTGTCGGCATGGATGATATTCTTCGCCCGTCCCCTTTCGGTATTTGCT GGATTGCTCCCCTTCCGCGGTTTCAATCTGCGTGAGCGCGTGTTTATCAGCTGGGTAGGATTACGCGGCGCGGTGCCAAT CATCCTGGCCGTGTTCCCGATGATGGCGGGGCTGGAGAATGCACGTCTGTTCTTTAATGTCGCCTTCTTTGTGGTTCTGG TTTCACTGCTCTTGCAGGGAACATCACTCTCGTGGGCGGCTAAAAAAGCCAAAGTGGTGGTTCCGCCAGTGGGACGTCCG GTGTCACGCGTTGGCCTGGATATTCATCCGGAAAATCCGTGGGAGCAGTTTGTTTATCAATTGAGTGCCGATAAATGGTG CGTGGGCGCGGCACTGCGCGATTTGCATATGCCAAAAGAGACGCGTATTGCGGCACTGTTTCGTGATAACCAGTTGCTTC ATCCTACCGGCAGCACCCGACTGCGCGAAGGCGATGTGTTGTGTGTAATTGGTCGGGAACGCGATCTTCCGGCGCTCGGT AAACTGTTCAGCCAGTCGCCGCCGGTCGCGCTGGATCAACGCTTCTTTGGTGACTTCATTCTCGAAGCCAGCGCCAAATA TGCTGATGTTGCGCTGATATATGGCCTGGAAGACGGGCGAGAATATCGTGATAAGCAGCAAACGCTGGGTGAAATTGTCC AGCAGTTGTTAGGCGCGGCACCGGTTGTCGGTGACCAGGTAGAGTTTGCCGGGATGATCTGGACGGTGGCCGAGAAAGAA GATAATGAAGTGTTGAAGATTGGCGTACGGGTGGCTGAAGAGGAAGCTGAATCTTAA
Upstream 100 bases:
>100_bases ATGTAAAAAAATCACGCTTCAGGGCTAAGTAAAACGCTGTCTCTGCCGCTAATATGGTAGGGTTTATATAAGAGACAGCG TAATCAGGAGTAACCGACCG
Downstream 100 bases:
>100_bases ATTTAATGAAGCATCTATCGCCGGTTGCGATGCTTTGCTGAACGCAGCCTGAGCCTGCAATTGTTTGTCGTCCATAATTT AACCTTCATTTGATGTTGAA
Product: potassium/proton antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRT QASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS NDPMAVFLTITLIAMIQQHESSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFALTTA LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFA GLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRP VSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALG KLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKE DNEVLKIGVRVAEEEAES
Sequences:
>Translated_578_residues MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRT QASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS NDPMAVFLTITLIAMIQQHESSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFALTTA LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFA GLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRP VSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALG KLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKE DNEVLKIGVRVAEEEAES >Mature_578_residues MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRT QASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS NDPMAVFLTITLIAMIQQHESSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFALTTA LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFA GLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRP VSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALG KLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKE DNEVLKIGVRVAEEEAES
Specific function: Participates in control of cell volume in low-osmolarity conditions
COG id: COG3263
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK C-terminal domain
Homologues:
Organism=Escherichia coli, GI87081854, Length=578, Percent_Identity=99.1349480968858, Blast_Score=1134, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CVRA_ECO24 (A7ZKW2)
Other databases:
- EMBL: CP000800 - RefSeq: YP_001462441.1 - ProteinModelPortal: A7ZKW2 - STRING: A7ZKW2 - EnsemblBacteria: EBESCT00000018878 - GeneID: 5589723 - GenomeReviews: CP000800_GR - KEGG: ecw:EcE24377A_1336 - eggNOG: COG3263 - GeneTree: EBGT00050000010798 - HOGENOM: HBG359889 - OMA: SEWELFV - ProtClustDB: PRK05326 - BioCyc: ECOL331111:ECE24377A_1336-MONOMER - HAMAP: MF_01075 - InterPro: IPR006153 - InterPro: IPR016169 - InterPro: IPR006037 - InterPro: IPR005170 - Gene3D: G3DSA:3.30.465.10
Pfam domain/function: PF03471 CorC_HlyC; PF00999 Na_H_Exchanger; PF02080 TrkA_C
EC number: NA
Molecular weight: Translated: 62206; Mature: 62206
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS51202 RCK_C
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x18929528)-; HASH(0x159d3d60)-; HASH(0x18b783ac)-; HASH(0x187d3e04)-; HASH(0x18c712c0)-; HASH(0x183b8f8c)-; HASH(0x19059dd0)-; HASH(0x18a85c1c)-; HASH(0x19260c9c)-; HASH(0x18ef8ae4)-; HASH(0x18d0e2f8)-; HASH(0x17e206b8)-; HASH(0x16b758a8)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCH AYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLI HHHHHHHHEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH EGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQQHE HHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHC SSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFALTTA CCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEHHH LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAI CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH PALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLEN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHCCCC ARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQ HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEECCCCCCHHHCCCCCCCCCHHHHHHHH LSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALG HCCCCHHHHHHHHHHCCCCHHHEEEEECCCEEECCCCCCCEECCCEEEEECCCCCCHHHH KLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAA HHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC PVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAEEEAES CCCCCCCHHCEEEEEEECCCCCCEEEEHHHHHHCCCCH >Mature Secondary Structure MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCH AYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLI HHHHHHHHEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH EGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQQHE HHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHC SSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFALTTA CCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEHHH LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAI CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH PALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLEN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHCCCC ARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQ HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEECCCCCCHHHCCCCCCCCCHHHHHHHH LSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALG HCCCCHHHHHHHHHHCCCCHHHEEEEECCCEEECCCCCCCEECCCEEEEECCCCCCHHHH KLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAA HHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC PVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAEEEAES CCCCCCCHHCEEEEEEECCCCCCEEEEHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA