Click here to switch to the map view.

The map label for this gene is 218692697

Identifier: 218692697

GI number: 218692697

Start: 5105467

End: 5106486

Strand: Direct

Name: 218692697

Synonym: ECED1_5175

Alternate gene names: NA

Gene position: 5105467-5106486 (Clockwise)

Preceding gene: 218692695

Following gene: 218692698

Centisome position: 98.0

GC content: 36.96

Gene sequence:

>1020_bases
ATGAATAACGAACAGATGCTTATCAAATGCAAAGATCCCCGTAAATGTCGGTTTTATGCCGAATATCTGAATCACAAATA
CCCCAATGAATTCCCTCAGTTTGCGCCTGACAACCCACAAAACTGTATCAGAAATGTTAATTCGTTTTTAAAAGAAAAGT
ATTATAAAGCTTCAAACAATTCTTTTGGTGTTTTTGGTTCGACTGCAGAAGAAGCTCTCAGCAAAGAAATTAATGAACTT
GAAATTATTGCAGGGCAGGCAATACTGCCTGAAGAGAGTTTTCTCTGGTTGAAAACTGACGAACTTGCGACTTTCTTTAC
CTGGACTACTATTTATCTGTCGAAGGAAGACCATACAAAATTCCCGAAAATAAACCATAATTCATCAGGAATAAAAAACG
GAATTGAAGTCAGGAAAATACGAACAGTTACCGATGAAACGTTAAATACTTACAAAAAAAGTAACCTTCCGGATAATCCA
TCATCCCATAACGAACGAATAAAAGTAATCATTTCATATTTTGACTCCTGCCATTCTTTAATTAATAAAAATGCAAAAAG
CATATACCTCGAGGAACTCAGACAGGCGTGGCTTAAAAAGAAAAGCGCTTGTCAAAAGTTTAAGTGGCTCCTTCCTGACG
ATGATGAAATGTGTCAGTGGTTCTGGACAAGACTGAAACAAAAACAGGATGAAAAACATCCAGTACATAACCCAGTGACC
CGGTGGTTCATACCATCTTCAACGAAAGAATATTATCTTGCCTCTCTTGTCGCCTTTGCTTTATGGAAAGAAGCGCCTGA
TACCATTGAACTGTTCAGAACACGAATAAATCATGCCTGGCATCAGAAAAAACAAAAGGACAAATATCGGAGTGATGGTA
AAAAGGCCATTAATATACATATAAGAAGCAATGTGAAAGAAATGCTTGATGAGCTCAGAACTGTTTACGGTCTGAGAACA
GGAGAGTTTTTTGAAATGCTGATTACAGAGAAATATCTTGAACACAAGCGAAGGAAGTAA

Upstream 100 bases:

>100_bases
AAAACATAAACAAATCACAACAAAAACATTTGATAATCACTTAGTGACAAAATAAAATTGAGACGATTTTGTTATAAGAG
AGGCGACATGGAGTGAGATA

Downstream 100 bases:

>100_bases
TTCATTACCTGTTACATTCTAAATAATCTCAGACAGATATTATCTCCGTGAATCCCCCGCCACCTTTCCGGTGCGCGGGG
TTTTGTCTTTTTTCACCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNNEQMLIKCKDPRKCRFYAEYLNHKYPNEFPQFAPDNPQNCIRNVNSFLKEKYYKASNNSFGVFGSTAEEALSKEINEL
EIIAGQAILPEESFLWLKTDELATFFTWTTIYLSKEDHTKFPKINHNSSGIKNGIEVRKIRTVTDETLNTYKKSNLPDNP
SSHNERIKVIISYFDSCHSLINKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMCQWFWTRLKQKQDEKHPVHNPVT
RWFIPSSTKEYYLASLVAFALWKEAPDTIELFRTRINHAWHQKKQKDKYRSDGKKAINIHIRSNVKEMLDELRTVYGLRT
GEFFEMLITEKYLEHKRRK

Sequences:

>Translated_339_residues
MNNEQMLIKCKDPRKCRFYAEYLNHKYPNEFPQFAPDNPQNCIRNVNSFLKEKYYKASNNSFGVFGSTAEEALSKEINEL
EIIAGQAILPEESFLWLKTDELATFFTWTTIYLSKEDHTKFPKINHNSSGIKNGIEVRKIRTVTDETLNTYKKSNLPDNP
SSHNERIKVIISYFDSCHSLINKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMCQWFWTRLKQKQDEKHPVHNPVT
RWFIPSSTKEYYLASLVAFALWKEAPDTIELFRTRINHAWHQKKQKDKYRSDGKKAINIHIRSNVKEMLDELRTVYGLRT
GEFFEMLITEKYLEHKRRK
>Mature_339_residues
MNNEQMLIKCKDPRKCRFYAEYLNHKYPNEFPQFAPDNPQNCIRNVNSFLKEKYYKASNNSFGVFGSTAEEALSKEINEL
EIIAGQAILPEESFLWLKTDELATFFTWTTIYLSKEDHTKFPKINHNSSGIKNGIEVRKIRTVTDETLNTYKKSNLPDNP
SSHNERIKVIISYFDSCHSLINKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMCQWFWTRLKQKQDEKHPVHNPVT
RWFIPSSTKEYYLASLVAFALWKEAPDTIELFRTRINHAWHQKKQKDKYRSDGKKAINIHIRSNVKEMLDELRTVYGLRT
GEFFEMLITEKYLEHKRRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40307; Mature: 40307

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNEQMLIKCKDPRKCRFYAEYLNHKYPNEFPQFAPDNPQNCIRNVNSFLKEKYYKASNN
CCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
SFGVFGSTAEEALSKEINELEIIAGQAILPEESFLWLKTDELATFFTWTTIYLSKEDHTK
CCCCCCCHHHHHHHHHHHHHHHEECCEECCCCCEEEEECCHHHHHEEEEEEEEECCCCCC
FPKINHNSSGIKNGIEVRKIRTVTDETLNTYKKSNLPDNPSSHNERIKVIISYFDSCHSL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
INKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMCQWFWTRLKQKQDEKHPVHNPVT
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
RWFIPSSTKEYYLASLVAFALWKEAPDTIELFRTRINHAWHQKKQKDKYRSDGKKAINIH
EEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
IRSNVKEMLDELRTVYGLRTGEFFEMLITEKYLEHKRRK
EHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNEQMLIKCKDPRKCRFYAEYLNHKYPNEFPQFAPDNPQNCIRNVNSFLKEKYYKASNN
CCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
SFGVFGSTAEEALSKEINELEIIAGQAILPEESFLWLKTDELATFFTWTTIYLSKEDHTK
CCCCCCCHHHHHHHHHHHHHHHEECCEECCCCCEEEEECCHHHHHEEEEEEEEECCCCCC
FPKINHNSSGIKNGIEVRKIRTVTDETLNTYKKSNLPDNPSSHNERIKVIISYFDSCHSL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
INKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMCQWFWTRLKQKQDEKHPVHNPVT
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
RWFIPSSTKEYYLASLVAFALWKEAPDTIELFRTRINHAWHQKKQKDKYRSDGKKAINIH
EEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
IRSNVKEMLDELRTVYGLRTGEFFEMLITEKYLEHKRRK
EHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA