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The map label for this gene is 218692662

Identifier: 218692662

GI number: 218692662

Start: 5070095

End: 5070880

Strand: Direct

Name: 218692662

Synonym: ECED1_5131

Alternate gene names: NA

Gene position: 5070095-5070880 (Clockwise)

Preceding gene: 218692661

Following gene: 218692664

Centisome position: 97.32

GC content: 54.07

Gene sequence:

>786_bases
TTGTTCGCACCTTCCATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGGCGTTCATTCGTTCTCTCTCGGT
TTCTCAGGAGCAGGAGCCTGCCGTTCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTA
ATGGTCGCTCACCGCTTCACGTGTTCGTTGCTGTTCCCGGATACAGCCGAATGTTGTACATCGAATTCACTGACAATATG
CGTTATGACACGCTGGAGACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAA
TATGAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCA
AGGAGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTAC
ACCCGTAACAGTTTTTACATCCCACTAATGACTCGCCTGCGCCCGATGGGGATCACTGTCGATGTTGAAACAGCCAACCG
CCACGGTCTGCGCTGGCTGCACGATGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCCCGTCCCTGCGATCGCTGGC
TCGAAGAGCAGCAGTCCATGCTGGCACTGCCTCCGGAGAAAAAAGAGTATGACGTGCATCCTGGTGAAAATCTGGTGAAC
TTCGATAAACACCCCCTGCATCATCCACTCTCCATCTACGACTCATTCTGCAGAGGAGTGGCGTGA

Upstream 100 bases:

>100_bases
CGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAA
CATGATCTCATATCAGGGAC

Downstream 100 bases:

>100_bases
TGATGGAACTGCAACATCAACGACTGATGGCGCTCGCCGGGCAGTTGCAACTGGAAAGCCTTATAAGCGCAGCGCCTGCG
CTGTCACAACAGGCAGTAGA

Product: transposase ORF A, IS100 (fragment)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MFAPSIRDQGYRGGMTILRAFIRSLSVSQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVPGYSRMLYIEFTDNM
RYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQY
TRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVN
FDKHPLHHPLSIYDSFCRGVA

Sequences:

>Translated_261_residues
MFAPSIRDQGYRGGMTILRAFIRSLSVSQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVPGYSRMLYIEFTDNM
RYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQY
TRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVN
FDKHPLHHPLSIYDSFCRGVA
>Mature_261_residues
MFAPSIRDQGYRGGMTILRAFIRSLSVSQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVPGYSRMLYIEFTDNM
RYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQY
TRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVN
FDKHPLHHPLSIYDSFCRGVA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR006120
- InterPro:   IPR012337 [H]

Pfam domain/function: PF02796 HTH_7; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 30667; Mature: 30667

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAPSIRDQGYRGGMTILRAFIRSLSVSQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLH
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCEE
VFVAVPGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQT
EEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHEEEECCHHHC
GQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITV
CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEHHHCCCCCCEEE
DVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVN
EEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCC
FDKHPLHHPLSIYDSFCRGVA
CCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MFAPSIRDQGYRGGMTILRAFIRSLSVSQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLH
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCEE
VFVAVPGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQT
EEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHEEEECCHHHC
GQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITV
CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEHHHCCCCCCEEE
DVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVN
EEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCC
FDKHPLHHPLSIYDSFCRGVA
CCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]