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The map label for this gene is ytfT [H]

Identifier: 218692619

GI number: 218692619

Start: 5020569

End: 5021921

Strand: Direct

Name: ytfT [H]

Synonym: ECED1_5086

Alternate gene names: 218692619

Gene position: 5020569-5021921 (Clockwise)

Preceding gene: 218692618

Following gene: 218692621

Centisome position: 96.37

GC content: 55.58

Gene sequence:

>1353_bases
TTGCGGCGTAAGGAGAACAGTGTGATGCCTCAATCTCTCCCGGACACTACGCCGCCGAAAAGGCGTTTTCGCTGGCCAAC
AGGAATGCCGCAGCTGGCGGCACTGTTGCTGGTGCTGCTGGTCGATAGCCTGGTGGCCCCGCATTTCTGGCAGGTGGTGC
TTCAGGATGGGCGTTTGTTCGGTAGCCCTATCGACATTCTTAACCGTGCGGCCCCCGTTGCGCTACTGGCGATTGGTATG
ACGCTGGTTATCGCCACCGGTGGGATTGATCTCTCCGTAGGGGCGGTGATGGCTATCGCCGGAGCCACAACGGCTGCGAT
GACGGTCGCGGGATTCAGCCTGCCAATTGTTTTGTTAAGCGCCCTCGGCACTGGCATCCTGGCGGGATTGTGGAACGGCA
TACTGGTAGCGATCCTCAAAATTCAGCCGTTTGTCGCCACCCTGATCCTGATGGTCGCCGGGCGCGGCGTGGCGCAACTG
ATCACCTCCGGACAGATCGTCACATTTAACTCACCGGATCTCTCCTGGTTCGGCAGTGGATCGCTATTGTTCCTGCCAAC
ACCAGTCATTATTGCGGTACTGACGCTTCTCCTGTTCTGGCTGTTGACCCGCAAAACGGCACTGGGGATGTTTATCGAAG
CTGTTGGTATCAACATTCGGGCGGCAAAAAATGCCGGGGTAAACACGCGGATCATCGTCATGCTCACCTACGTGTTGAGC
GGGCTATGTGCGGCGATTGCGGGCATTATCGTGGCGGCGGATATTCGCGGTGCCGATGCCAACAACGCCGGCTTATGGCT
GGAGCTGGACGCCATTCTTGCAGTGGTGATTGGCGGTGGTCGCTTAAGTGCGATGGGACTACTGATGCTGGCGGTGGTGG
TTATCGGCATATTACTCGCGCATCGTACCCGTTTTGGTAATCAGGTATACGCCATTGGCGGCAACGCAACGTCGGCAAAC
CTGATGGGGATTTCCACTCGCAGCACCACTATTCGCATTTATATGCTCTCCACCGGACTGGCAACGCTGGCGGGGATTGT
CTTCTCGATTTATACCCAGGCCGGATATGCACTGGCGGGCGTAGGTGTGGAACTGGATGCTATCGCCTCAGTGGTAATTG
GCGGTACGCTTTTGAGTGGTGGCGTTGGAACGGTATTAGGGACGCTTTTTGGCGTGGCGATTCAGGGACTGATTCAGACT
TACATAAACTTTGATGGCACGCTGAGTTCCTGGTGGACGAAAATCGCCATCGGTATTTTGTTGTTTATTTTTATAGCATT
ACAGCGTGGATTAACGGTGCTGTGGGAGAATCGTCAGAGTTCGCCAGTGACAAGAGTCAACATTGCGCAGTGA

Upstream 100 bases:

>100_bases
CTGGTGGGTTATGCCGACCGGGTGATTATCATGCGCGATCGCAAACAGGTAACGGAGATCCCACTGGCAGAGCTTTCCGT
TCCGGCGATCATGAACGCCA

Downstream 100 bases:

>100_bases
TAAAAACGCCTCTCCGTGTGGAGAGGCGCAGGAGCTTACGCGTCCGGGAACTCACGGATAAAGCGTTCGACATCTTCAAC
CATATGGTCGTTGCCGACAA

Product: putative sugar ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MRRKENSVMPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGM
TLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQL
ITSGQIVTFNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLS
GLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGRLSAMGLLMLAVVVIGILLAHRTRFGNQVYAIGGNATSAN
LMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQT
YINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTRVNIAQ

Sequences:

>Translated_450_residues
MRRKENSVMPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGM
TLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQL
ITSGQIVTFNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLS
GLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGRLSAMGLLMLAVVVIGILLAHRTRFGNQVYAIGGNATSAN
LMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQT
YINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTRVNIAQ
>Mature_450_residues
MRRKENSVMPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGM
TLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQL
ITSGQIVTFNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLS
GLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGRLSAMGLLMLAVVVIGILLAHRTRFGNQVYAIGGNATSAN
LMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQT
YINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTRVNIAQ

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693214, Length=310, Percent_Identity=89.6774193548387, Blast_Score=468, Evalue=1e-133,
Organism=Escherichia coli, GI87082395, Length=189, Percent_Identity=92.0634920634921, Blast_Score=331, Evalue=5e-92,
Organism=Escherichia coli, GI1790191, Length=275, Percent_Identity=37.4545454545455, Blast_Score=132, Evalue=6e-32,
Organism=Escherichia coli, GI1788896, Length=290, Percent_Identity=33.1034482758621, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI145693152, Length=282, Percent_Identity=35.4609929078014, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790524, Length=217, Percent_Identity=32.258064516129, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787793, Length=204, Percent_Identity=38.2352941176471, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789992, Length=281, Percent_Identity=30.9608540925267, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1788471, Length=221, Percent_Identity=31.2217194570136, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 47035; Mature: 47035

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRKENSVMPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLF
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GSPIDILNRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLS
CCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVTFNSPDLSWFGSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCEECCC
SLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLS
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHH
GLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGRLSAMGLLMLAVVVIGILLA
HHHHHHHHHHHEEECCCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
HRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAG
HHHHCCCEEEEECCCCCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEE
VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGIL
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LFIFIALQRGLTVLWENRQSSPVTRVNIAQ
HHHHHHHHCCCEEEECCCCCCCCCEEEECC
>Mature Secondary Structure
MRRKENSVMPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLF
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GSPIDILNRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLS
CCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVTFNSPDLSWFGSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCEECCC
SLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLS
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHH
GLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGRLSAMGLLMLAVVVIGILLA
HHHHHHHHHHHEEECCCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
HRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAG
HHHHCCCEEEEECCCCCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEE
VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGIL
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LFIFIALQRGLTVLWENRQSSPVTRVNIAQ
HHHHHHHHCCCEEEECCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]