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The map label for this gene is ytfA [H]

Identifier: 218692595

GI number: 218692595

Start: 4993541

End: 4994260

Strand: Direct

Name: ytfA [H]

Synonym: ECED1_5062

Alternate gene names: 218692595

Gene position: 4993541-4994260 (Clockwise)

Preceding gene: 218692588

Following gene: 218692597

Centisome position: 95.85

GC content: 40.69

Gene sequence:

>720_bases
TTGCCCTTTTTTCTGAAGCTGAAATCAAATCAGGTTATGATAGTCACCACGAAGAGGTCGTGGGGAAGCGTTATGTATCT
TGATACCAGCAACGTACAGAGCCTGAAAGAAAAGCTGCTGTTATGCGCGGTTAATGAATTTGCCGAATATGGTTACGAAG
GGGCCAGAGTCGATAATATCGTCAAGGCCGCGGGGTGCAGTAAACAGACGGTTTATCACCACTTTGGTAATAAAGAAAAT
TTATTTATCGAAGTACTGGAATATACCTGGAACGATATTCGACAAAAAGAAAAGGCCCTTGATTTCTCAGATCTTCCGCC
ACAAAAAGCCATTGAGAAAATAATCGATTTTACATGGGATTATTATATTTATAATCCCTGGTTTTTAAAAATTGTGCATA
GTGAAAATCAAAGTAAGGGTGTGCATTATGCAAAGTCACAGCGTCTTTTAGAAATTAACCATGCGCACTTGCAGTTAATG
GAATCCTTATTGGATGAAGGGAAGAAAAACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGC
TGCGCTTGGGGGATATTATTTGATCAACCAGCATACGCTTGGTCTGGTTTATCACATCAGTATGGTTTCACCGCAGGCAC
TGGAAGCCAGACGTAAGGTCATCAAAGAGACGATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCGCGAATAA

Upstream 100 bases:

>100_bases
GATTAGCTTGCGACTGGAGGATAAAAAGATCAACCATCTAGTTGGTTGATATGCGATGGCGATCACAGGACATTTGATAA
CCTGATGAAAGTACAAGTTT

Downstream 100 bases:

>100_bases
AACTGCCATCCGGCTGGCGGGTAAACAGGACCTGTTGATTATTCCCCGTATCAATGGTTAAGCCCGTCACCACGCCGCTG
GCGTTCTGGCGGATTTTCAC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MPFFLKLKSNQVMIVTTKRSWGSVMYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHFGNKEN
LFIEVLEYTWNDIRQKEKALDFSDLPPQKAIEKIIDFTWDYYIYNPWFLKIVHSENQSKGVHYAKSQRLLEINHAHLQLM
ESLLDEGKKNNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETILSWLLVDPSSTARE

Sequences:

>Translated_239_residues
MPFFLKLKSNQVMIVTTKRSWGSVMYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHFGNKEN
LFIEVLEYTWNDIRQKEKALDFSDLPPQKAIEKIIDFTWDYYIYNPWFLKIVHSENQSKGVHYAKSQRLLEINHAHLQLM
ESLLDEGKKNNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETILSWLLVDPSSTARE
>Mature_238_residues
PFFLKLKSNQVMIVTTKRSWGSVMYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHFGNKENL
FIEVLEYTWNDIRQKEKALDFSDLPPQKAIEKIIDFTWDYYIYNPWFLKIVHSENQSKGVHYAKSQRLLEINHAHLQLME
SLLDEGKKNNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETILSWLLVDPSSTARE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015893
- InterPro:   IPR011075 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27625; Mature: 27494

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFFLKLKSNQVMIVTTKRSWGSVMYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNI
CCEEEEECCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
VKAAGCSKQTVYHHFGNKENLFIEVLEYTWNDIRQKEKALDFSDLPPQKAIEKIIDFTWD
HHHCCCCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
YYIYNPWFLKIVHSENQSKGVHYAKSQRLLEINHAHLQLMESLLDEGKKNNIFKPDIDPL
EEEECCEEEEEEECCCCCCCCEEHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEE
QVNINIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETILSWLLVDPSSTARE
EEEEEEEEECCEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCCCCCC
>Mature Secondary Structure 
PFFLKLKSNQVMIVTTKRSWGSVMYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNI
CEEEEECCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
VKAAGCSKQTVYHHFGNKENLFIEVLEYTWNDIRQKEKALDFSDLPPQKAIEKIIDFTWD
HHHCCCCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
YYIYNPWFLKIVHSENQSKGVHYAKSQRLLEINHAHLQLMESLLDEGKKNNIFKPDIDPL
EEEECCEEEEEEECCCCCCCCEEHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEE
QVNINIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETILSWLLVDPSSTARE
EEEEEEEEECCEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]