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The map label for this gene is thiH [H]

Identifier: 218692270

GI number: 218692270

Start: 4650045

End: 4651178

Strand: Reverse

Name: thiH [H]

Synonym: ECED1_4696

Alternate gene names: 218692270

Gene position: 4651178-4650045 (Counterclockwise)

Preceding gene: 218692271

Following gene: 218692260

Centisome position: 89.28

GC content: 54.32

Gene sequence:

>1134_bases
ATGAAAACCTTTAGCGATCGCTGGCGACAACTGGACTGGGATGACATCCACCTGCGTATCAACGGCAAAACGGCTGCTGA
CGTAGAGCGGGCGCTAAATGCCTCGCAACTCACCCGCGACGACATGATGGCATTGCTATCACCCGCCGCCAGTGGCTATC
TGGAACCACTGGCCCAGCGAGCGCAACGTCTGACTCGTCAGCGATTTGGCAACGTCGTCAGCTTCTACGTCCCGCTTTAT
CTTTCCAATCTTTGCGCTAACGACTGTACTTATTGCGGATTTTCTATGAGCAACCGCATCAAGCGCAAAACGCTGGATGA
AGCGGATATTGCCAGAGAAAGCGCCGCTATACGGGAGATGGGCTTTGAACATCTGCTATTAGTCACTGGTGAACATCAGG
CGAAAGTGGGGATGGATTACTTTCGTCGTCATCTCCCTGCCCTGCGTGAACAGTTCTCTTCACTACAGATGGAAGTGCAA
CCGCTGGCGGAGGCGGAATATGCCGAGTTAAAACAGCTTGGCCTCGATGGAGTAATGGTTTATCAGGAGACATATCATGA
GGCGACTTATGCCCATCATCATCTGAAAGGTAAAAAACAGGACTTCTTCTGGCGGCTGGAAACGCCGGATCGGCTAGGGC
GTGCGGGGATTGATAAGATAGGCCTCGGCGCGCTAATCGGCCTTTCCGACAGCTGGCGAGTTGACTGCTATATGGTTGTC
GAACATTTGCTATGGCTGCAACAGCATTACTGGCAAAGCCGCTACTCTGTCTCCTTCCCACGCCTGCGTCCATGTACTGG
CGGCATTGAGCCTGCGTCGATTATGGATGAACGCCAGTTAGTGCAAGCCATCTGCGCTTTCCGGCTGCTTGCACCGGAGA
TTGAACTGTCACTCTCCACGCGGGAATCACCGTGGTTTCGCGATCGCGTGATTCCGCTGGCAATTAATAACGTCAGCGCT
TTTTCGAAAACGCAGCCAGGTGGCTATGCCGACAACCACCCCGAGCTGGAACAGTTCTCACCGCACGACGATCGCAGACC
GGAAGCGGTTGCTGCCGCGTTAACCGCTCAGGGTTTGCAGCCGGTATGGAAAGACTGGGACAGCTATCTGGGACGCCCAT
CGCAAAGGGCATGA

Upstream 100 bases:

>100_bases
CGGTAGAAGCAGGCCTGCTGGCACGTCAGTCCGGACCGGGCAGCCGCAGTCATTTTGCTCATGCCACCAGCCCGCTGACT
GGATTTCTGGAGGCATCGGC

Downstream 100 bases:

>100_bases
GACAGTATGTAAGAACGTAAATTTATTCCGAGCCGCTACGGAAGATGAAAAACGCAAGGTTGTTGAAAGCGTTGTGTTTT
TTTATGGTAGTGCCGTCAGC

Product: thiamine biosynthesis protein ThiH

Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]

Alternate protein names: Dehydroglycine synthase; Tyrosine lyase [H]

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKTFSDRWRQLDWDDIHLRINGKTAADVERALNASQLTRDDMMALLSPAASGYLEPLAQRAQRLTRQRFGNVVSFYVPLY
LSNLCANDCTYCGFSMSNRIKRKTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQ
PLAEAEYAELKQLGLDGVMVYQETYHEATYAHHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDSWRVDCYMVV
EHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQAICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSA
FSKTQPGGYADNHPELEQFSPHDDRRPEAVAAALTAQGLQPVWKDWDSYLGRPSQRA

Sequences:

>Translated_377_residues
MKTFSDRWRQLDWDDIHLRINGKTAADVERALNASQLTRDDMMALLSPAASGYLEPLAQRAQRLTRQRFGNVVSFYVPLY
LSNLCANDCTYCGFSMSNRIKRKTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQ
PLAEAEYAELKQLGLDGVMVYQETYHEATYAHHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDSWRVDCYMVV
EHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQAICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSA
FSKTQPGGYADNHPELEQFSPHDDRRPEAVAAALTAQGLQPVWKDWDSYLGRPSQRA
>Mature_377_residues
MKTFSDRWRQLDWDDIHLRINGKTAADVERALNASQLTRDDMMALLSPAASGYLEPLAQRAQRLTRQRFGNVVSFYVPLY
LSNLCANDCTYCGFSMSNRIKRKTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQ
PLAEAEYAELKQLGLDGVMVYQETYHEATYAHHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDSWRVDCYMVV
EHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQAICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSA
FSKTQPGGYADNHPELEQFSPHDDRRPEAVAAALTAQGLQPVWKDWDSYLGRPSQRA

Specific function: Catalyzes the radical-mediated cleavage of tyrosine to 2-iminoacetate and 4-cresol [H]

COG id: COG1060

COG function: function code HR; Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. ThiH family [H]

Homologues:

Organism=Escherichia coli, GI1790423, Length=376, Percent_Identity=97.3404255319149, Blast_Score=761, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR010722
- InterPro:   IPR007197
- InterPro:   IPR012726 [H]

Pfam domain/function: PF06968 BATS; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43191; Mature: 43191

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFSDRWRQLDWDDIHLRINGKTAADVERALNASQLTRDDMMALLSPAASGYLEPLAQR
CCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRLTRQRFGNVVSFYVPLYLSNLCANDCTYCGFSMSNRIKRKTLDEADIARESAAIREM
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHC
GFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQPLAEAEYAELKQLGLDGVMV
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
YQETYHEATYAHHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDSWRVDCYMVV
HHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCHHCCHHEEECCCCCCHHHHHHH
EHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQAICAFRLLAPEIELSLST
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
RESPWFRDRVIPLAINNVSAFSKTQPGGYADNHPELEQFSPHDDRRPEAVAAALTAQGLQ
CCCCCHHHCEEEEEECCCHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCC
PVWKDWDSYLGRPSQRA
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKTFSDRWRQLDWDDIHLRINGKTAADVERALNASQLTRDDMMALLSPAASGYLEPLAQR
CCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRLTRQRFGNVVSFYVPLYLSNLCANDCTYCGFSMSNRIKRKTLDEADIARESAAIREM
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHC
GFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQPLAEAEYAELKQLGLDGVMV
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
YQETYHEATYAHHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDSWRVDCYMVV
HHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCHHCCHHEEECCCCCCHHHHHHH
EHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQAICAFRLLAPEIELSLST
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
RESPWFRDRVIPLAINNVSAFSKTQPGGYADNHPELEQFSPHDDRRPEAVAAALTAQGLQ
CCCCCHHHCEEEEEECCCHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCC
PVWKDWDSYLGRPSQRA
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]

Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8432721; 8265357; 9278503; 10082377 [H]