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The map label for this gene is yijD

Identifier: 218692254

GI number: 218692254

Start: 4622378

End: 4622737

Strand: Direct

Name: yijD

Synonym: ECED1_4673

Alternate gene names: 218692254

Gene position: 4622378-4622737 (Clockwise)

Preceding gene: 218692253

Following gene: 229598867

Centisome position: 88.73

GC content: 48.06

Gene sequence:

>360_bases
ATGAAACAAGCAAATCAAGATAGAGGTACGCTGCTGCTAGCGTTGGTTGCTGGCTTATCGATCAATGGTACTTTTGCAGC
GCTGTTTAGCTCCATTGTACCATTTTCTGTATTCCCGATTATTTCCCTGGTGTTGACAGTTTACTGCCTGCATCAACGTT
ATCTTAATCGCACTATGCCGGTAGGCTTGCCGGGTCTGGCAGCTGCTTGTTTTATTCTCGGCGTACTGCTGTACAGCACG
GTAGTTCGTGCGGAATATCCGGATATCGGCTCTAACTTCTTCCCGGCAGTACTGTCCGTCATTATGGTGTTCTGGATTGG
CGCGAAGATGCGTAACCGTAAGCAGGAAGTTGCTGAGTAA

Upstream 100 bases:

>100_bases
TGGTACTGCAGCTGCGAATGATTTCGAAAGGGGCTTATTACTGGTATCGCCGTGAACAAGAGAAAACCACAATTATTCCG
GGAAATGTGAAGGACGAGTA

Downstream 100 bases:

>100_bases
TCGGTATCATGCCGGATGCAAGCGCATCCGGCATGGGTTTTACTTCGCGGTCAGTAATACGCCGCACTCCATATGGTGCG
TGTAGGGGAACTGATCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYST
VVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE

Sequences:

>Translated_119_residues
MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYST
VVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE
>Mature_119_residues
MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYST
VVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790402, Length=119, Percent_Identity=100, Blast_Score=242, Evalue=5e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIJD_ECO57 (P0AF42)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D86088
- PIR:   G91240
- RefSeq:   NP_290603.1
- RefSeq:   NP_312922.1
- ProteinModelPortal:   P0AF42
- EnsemblBacteria:   EBESCT00000025409
- EnsemblBacteria:   EBESCT00000059520
- GeneID:   914979
- GeneID:   960166
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z5525
- KEGG:   ecs:ECs4895
- GeneTree:   EBGT00050000009543
- HOGENOM:   HBG298789
- OMA:   EAGSNFF
- ProtClustDB:   PRK11056
- BioCyc:   ECOL83334:ECS4895-MONOMER
- InterPro:   IPR009867
- ProDom:   PD076479

Pfam domain/function: PF07226 DUF1422

EC number: NA

Molecular weight: Translated: 13024; Mature: 13024

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x25a432b0)-; HASH(0x24ff5e50)-; HASH(0x2501b708)-; HASH(0x25ab20cc)-;

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMP
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMP
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796