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The map label for this gene is dgoA [H]

Identifier: 218692123

GI number: 218692123

Start: 4471676

End: 4472305

Strand: Reverse

Name: dgoA [H]

Synonym: ECED1_4532

Alternate gene names: 218692123

Gene position: 4472305-4471676 (Counterclockwise)

Preceding gene: 218692124

Following gene: 218692122

Centisome position: 85.85

GC content: 53.81

Gene sequence:

>630_bases
ATGCCATTTAATACACTTTTGCAAAAAACCGGGTTAGTCGCCATTTTACGCGGCGTGAAACCGGATGAGATTGTCGCCAT
CGGTGAAAAACTGTACGCCGCCGGATTCCGCCTGATTGAGATTCCTATGAACTCGCCGGAGGCGTTGCAAAGTATCAGTT
TACTGCGCGACGCCCTGCCTAAGGACTGCCTGGTCGGAGCCGGAACTGTGCTTTCGGTAGAGCAGGTGGTTGCGGTTAAA
GAGGCTGGGGGCCAGATTATCGTGATGCCGCATTGCGATACTGCGGTGATCCGTCGCGCCCGTGCGCTGGGTATGTATTG
TGCGCCTGGCGTCGCCACGCCCACCGAAGCCTTTGCTGCCATTGAACATGGTGCTAATGCCATCAAGCTGTTCCCGGCTG
AACAAATTACGCCAGAAGTTACCAAAGCCTGGCGTGCGGTTATTCCACAATCCGTTCCGATGTTACCGGTTGGCGGTATC
ACACCGGAAACCATGGCGCGTTATCTGAGCCACGGCGCAAACGGCTTTGGCCTCGGTTCTGCGCTATATCGCCCCGGCAT
GACGCCAGAGCAAGTCTATGAAAATGCAGTACTGTTTATGAACGCATGGAACAATTTAAATAGCAACTAA

Upstream 100 bases:

>100_bases
GACAGACAGATACACGCCATTCCTAATGCCACTGAACATGGATTATGGCGAATCGCCCACGCTGCCGGGTTACTGTCCAC
CAACGCCAGGGAATGTACCC

Downstream 100 bases:

>100_bases
CTGATAAATAAGGATATAAAAGCAATGATAAAACATCTTACCTTACCGAAAAAAATGGCTGCAATGGTACTTCTTGCAGG
CGCTGCCCTCAGCATTGCGC

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MPFNTLLQKTGLVAILRGVKPDEIVAIGEKLYAAGFRLIEIPMNSPEALQSISLLRDALPKDCLVGAGTVLSVEQVVAVK
EAGGQIIVMPHCDTAVIRRARALGMYCAPGVATPTEAFAAIEHGANAIKLFPAEQITPEVTKAWRAVIPQSVPMLPVGGI
TPETMARYLSHGANGFGLGSALYRPGMTPEQVYENAVLFMNAWNNLNSN

Sequences:

>Translated_209_residues
MPFNTLLQKTGLVAILRGVKPDEIVAIGEKLYAAGFRLIEIPMNSPEALQSISLLRDALPKDCLVGAGTVLSVEQVVAVK
EAGGQIIVMPHCDTAVIRRARALGMYCAPGVATPTEAFAAIEHGANAIKLFPAEQITPEVTKAWRAVIPQSVPMLPVGGI
TPETMARYLSHGANGFGLGSALYRPGMTPEQVYENAVLFMNAWNNLNSN
>Mature_208_residues
PFNTLLQKTGLVAILRGVKPDEIVAIGEKLYAAGFRLIEIPMNSPEALQSISLLRDALPKDCLVGAGTVLSVEQVVAVKE
AGGQIIVMPHCDTAVIRRARALGMYCAPGVATPTEAFAAIEHGANAIKLFPAEQITPEVTKAWRAVIPQSVPMLPVGGIT
PETMARYLSHGANGFGLGSALYRPGMTPEQVYENAVLFMNAWNNLNSN

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=197, Percent_Identity=46.1928934010152, Blast_Score=172, Evalue=1e-44,
Organism=Escherichia coli, GI1788156, Length=151, Percent_Identity=29.8013245033113, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 22280; Mature: 22149

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFNTLLQKTGLVAILRGVKPDEIVAIGEKLYAAGFRLIEIPMNSPEALQSISLLRDALP
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCC
KDCLVGAGTVLSVEQVVAVKEAGGQIIVMPHCDTAVIRRARALGMYCAPGVATPTEAFAA
HHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
IEHGANAIKLFPAEQITPEVTKAWRAVIPQSVPMLPVGGITPETMARYLSHGANGFGLGS
HHCCCCEEEECCCHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCH
ALYRPGMTPEQVYENAVLFMNAWNNLNSN
HHHCCCCCHHHHHCCCEEEEECCCCCCCC
>Mature Secondary Structure 
PFNTLLQKTGLVAILRGVKPDEIVAIGEKLYAAGFRLIEIPMNSPEALQSISLLRDALP
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCC
KDCLVGAGTVLSVEQVVAVKEAGGQIIVMPHCDTAVIRRARALGMYCAPGVATPTEAFAA
HHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
IEHGANAIKLFPAEQITPEVTKAWRAVIPQSVPMLPVGGITPETMARYLSHGANGFGLGS
HHCCCCEEEECCCHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCH
ALYRPGMTPEQVYENAVLFMNAWNNLNSN
HHHCCCCCHHHHHCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]