| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218691888
Identifier: 218691888
GI number: 218691888
Start: 4208745
End: 4209428
Strand: Direct
Name: 218691888
Synonym: ECED1_4287
Alternate gene names: NA
Gene position: 4208745-4209428 (Clockwise)
Preceding gene: 218691886
Following gene: 218691889
Centisome position: 80.79
GC content: 39.62
Gene sequence:
>684_bases ATGAACCTAAAGAAAACACTGTTAAGCGTGTTAATGATATTGCAACTTTGCTTATTGGTAGGGTGTGACTATATTGAAAA AGCGAGTAAGGTCGACGACCTCGTTACACAGCAAGAGTTGCAAAAAAGCAAAATTGAGGCGCTTGAAAAACAACAAGAAC TCGACAAGCGCAAGATAGAACACTTTGAAAAACAACAAACTACCATCATAAACAGTACCAAAACACTCGCTGGTGTGGTG AAGGCAGTTAAAGACAAACAGGACGAATTTGTCTTTACAGAATTTAACCCGGCACAAACCCAATACTTCATTTTAAATAA CGGTTCTGTTGGTTTGGCAGGGAAAATACTGTCTATTGACGCAGTAGAAAACGGCAGTGTTATTCGTATTTCACTGGTTA ACTTATTAAGTGTTCCTGTATCAAATATGGGTTTCTACGCGACATGGGGGGGAGAAAAACCCACCGACATCAACGCATTA GCAAAATGGCAGCAATTGCTATTTAGTACCTCAATGAACTCCTCCCTGAAATTATTACCAGGTCAATGGCAAGACATTAA TTTGACGCTAAAAGGTGTCTCGCCCAACAACCTCAAATATCTGAAATTAGCCATCAACATGGCAAATATTCAGTTCGACC GTCTTCAACCTGCTGAATCTCCACAGCGGAAAAACAAAAAATAA
Upstream 100 bases:
>100_bases AAATTTATTTTGCGGATATGTCCCACTCCAATCATTCATAAAAAAAATGATTGTGCCGTAATTATCAACTGTATCGGGAT TATGAAAAGGAATTCATCCT
Downstream 100 bases:
>100_bases ATGCAGCTTCTGCGCTTATATCAAGGAATAGAGAGCATCAATAATGAATAAAATATTTAAAGTTATCTGGAATCCGGCAA CAGGCAGTTACACCGTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNLKKTLLSVLMILQLCLLVGCDYIEKASKVDDLVTQQELQKSKIEALEKQQELDKRKIEHFEKQQTTIINSTKTLAGVV KAVKDKQDEFVFTEFNPAQTQYFILNNGSVGLAGKILSIDAVENGSVIRISLVNLLSVPVSNMGFYATWGGEKPTDINAL AKWQQLLFSTSMNSSLKLLPGQWQDINLTLKGVSPNNLKYLKLAINMANIQFDRLQPAESPQRKNKK
Sequences:
>Translated_227_residues MNLKKTLLSVLMILQLCLLVGCDYIEKASKVDDLVTQQELQKSKIEALEKQQELDKRKIEHFEKQQTTIINSTKTLAGVV KAVKDKQDEFVFTEFNPAQTQYFILNNGSVGLAGKILSIDAVENGSVIRISLVNLLSVPVSNMGFYATWGGEKPTDINAL AKWQQLLFSTSMNSSLKLLPGQWQDINLTLKGVSPNNLKYLKLAINMANIQFDRLQPAESPQRKNKK >Mature_227_residues MNLKKTLLSVLMILQLCLLVGCDYIEKASKVDDLVTQQELQKSKIEALEKQQELDKRKIEHFEKQQTTIINSTKTLAGVV KAVKDKQDEFVFTEFNPAQTQYFILNNGSVGLAGKILSIDAVENGSVIRISLVNLLSVPVSNMGFYATWGGEKPTDINAL AKWQQLLFSTSMNSSLKLLPGQWQDINLTLKGVSPNNLKYLKLAINMANIQFDRLQPAESPQRKNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25470; Mature: 25470
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKKTLLSVLMILQLCLLVGCDYIEKASKVDDLVTQQELQKSKIEALEKQQELDKRKIE CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFEKQQTTIINSTKTLAGVVKAVKDKQDEFVFTEFNPAQTQYFILNNGSVGLAGKILSID HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEE AVENGSVIRISLVNLLSVPVSNMGFYATWGGEKPTDINALAKWQQLLFSTSMNSSLKLLP EECCCCEEEEEHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECC GQWQDINLTLKGVSPNNLKYLKLAINMANIQFDRLQPAESPQRKNKK CCCCEEEEEEECCCCCCEEEEEEEEEEEHEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNLKKTLLSVLMILQLCLLVGCDYIEKASKVDDLVTQQELQKSKIEALEKQQELDKRKIE CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFEKQQTTIINSTKTLAGVVKAVKDKQDEFVFTEFNPAQTQYFILNNGSVGLAGKILSID HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEE AVENGSVIRISLVNLLSVPVSNMGFYATWGGEKPTDINALAKWQQLLFSTSMNSSLKLLP EECCCCEEEEEHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECC GQWQDINLTLKGVSPNNLKYLKLAINMANIQFDRLQPAESPQRKNKK CCCCEEEEEEECCCCCCEEEEEEEEEEEHEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA