| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218691704
Identifier: 218691704
GI number: 218691704
Start: 3996762
End: 3997472
Strand: Reverse
Name: 218691704
Synonym: ECED1_4089
Alternate gene names: NA
Gene position: 3997472-3996762 (Counterclockwise)
Preceding gene: 218691705
Following gene: 218691703
Centisome position: 76.73
GC content: 45.99
Gene sequence:
>711_bases ATGGAATTAGTTGATACGTTATTTGCAAGCCTCTCCGGTACTGATCCATTCACTGGCGTGGATATTACGATTGCCAACTG CAAATCAACATACTGGGATGAAGGCATTGTTCAGCAACTCATTAACCAGGTCCTGGATGAAGGGGAAAAGTTCGCCGGTG CTGCCGGTCTTGAGGGATTATCTCGATATGATGTCACATTAAATATTGGTTTAACGTCCAGCAATGTATGGCCGGGATTT TCCCTCGATACCGCCACCATTAGCCGTCTTTGTGCCTGTGGTGCTGACTTTGGATTTGACCTCTATATCAGTGATGTACC AGATGTTCAATGTGATCTGAACACGACAAATGACTTCACCGTACAATTTACGGCGATGCTCAACCCGGATGAGCGGGTGA TCATAGCAAAGCGTCCGCTTAAAAAATGTGACGCCTGGATTGAGGATGTTTATATCTTTCAAGTGTTTAAAGAAGCCTGG CAATTTCAAAACGATAACAGTTTACGCGGATTTCGCGATAAGCAGGCTGAACTGAAACTCTACGTGCGTCATTACTCAGT GGAAAATTGCACAGAGGAAAGCTGTTGGGACTGTAATTATTGCATTCGGCCCAGCTTTTCCCTCTCTCGTAGTGCCATTA TTCGCCTGAATGCGGCGAATGCTCGTTTTGTCTATCAACCCTTTACACGCGATCAGCGGGCGAGGGGGTAA
Upstream 100 bases:
>100_bases AAAACAAAAAAATATTTTTAATTCTACAGGGGAAAAACCTGGTGGAAAATGTAGGTTATGTGCCGATGAATAAAATGTTG CATTAAGCCGGATAATAAAA
Downstream 100 bases:
>100_bases TTATGCACCCCACTCCTGCCATGCAGGCATTAATTGAGCAGATATATCATATTTTTCGTCGTTATCCGGCGCCGAAGCAA TTTGTGGTTTGTTGTGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MELVDTLFASLSGTDPFTGVDITIANCKSTYWDEGIVQQLINQVLDEGEKFAGAAGLEGLSRYDVTLNIGLTSSNVWPGF SLDTATISRLCACGADFGFDLYISDVPDVQCDLNTTNDFTVQFTAMLNPDERVIIAKRPLKKCDAWIEDVYIFQVFKEAW QFQNDNSLRGFRDKQAELKLYVRHYSVENCTEESCWDCNYCIRPSFSLSRSAIIRLNAANARFVYQPFTRDQRARG
Sequences:
>Translated_236_residues MELVDTLFASLSGTDPFTGVDITIANCKSTYWDEGIVQQLINQVLDEGEKFAGAAGLEGLSRYDVTLNIGLTSSNVWPGF SLDTATISRLCACGADFGFDLYISDVPDVQCDLNTTNDFTVQFTAMLNPDERVIIAKRPLKKCDAWIEDVYIFQVFKEAW QFQNDNSLRGFRDKQAELKLYVRHYSVENCTEESCWDCNYCIRPSFSLSRSAIIRLNAANARFVYQPFTRDQRARG >Mature_236_residues MELVDTLFASLSGTDPFTGVDITIANCKSTYWDEGIVQQLINQVLDEGEKFAGAAGLEGLSRYDVTLNIGLTSSNVWPGF SLDTATISRLCACGADFGFDLYISDVPDVQCDLNTTNDFTVQFTAMLNPDERVIIAKRPLKKCDAWIEDVYIFQVFKEAW QFQNDNSLRGFRDKQAELKLYVRHYSVENCTEESCWDCNYCIRPSFSLSRSAIIRLNAANARFVYQPFTRDQRARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26691; Mature: 26691
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELVDTLFASLSGTDPFTGVDITIANCKSTYWDEGIVQQLINQVLDEGEKFAGAAGLEGL CCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCC SRYDVTLNIGLTSSNVWPGFSLDTATISRLCACGADFGFDLYISDVPDVQCDLNTTNDFT EEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCEE VQFTAMLNPDERVIIAKRPLKKCDAWIEDVYIFQVFKEAWQFQNDNSLRGFRDKQAELKL EEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEE YVRHYSVENCTEESCWDCNYCIRPSFSLSRSAIIRLNAANARFVYQPFTRDQRARG EEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCC >Mature Secondary Structure MELVDTLFASLSGTDPFTGVDITIANCKSTYWDEGIVQQLINQVLDEGEKFAGAAGLEGL CCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCC SRYDVTLNIGLTSSNVWPGFSLDTATISRLCACGADFGFDLYISDVPDVQCDLNTTNDFT EEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCEE VQFTAMLNPDERVIIAKRPLKKCDAWIEDVYIFQVFKEAWQFQNDNSLRGFRDKQAELKL EEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEE YVRHYSVENCTEESCWDCNYCIRPSFSLSRSAIIRLNAANARFVYQPFTRDQRARG EEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA