Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
Click here to switch to the map view.
The map label for this gene is damX [H]
Identifier: 218691664
GI number: 218691664
Start: 3948104
End: 3949390
Strand: Reverse
Name: damX [H]
Synonym: ECED1_4046
Alternate gene names: 218691664
Gene position: 3949390-3948104 (Counterclockwise)
Preceding gene: 218691665
Following gene: 218691663
Centisome position: 75.81
GC content: 54.16
Gene sequence:
>1287_bases ATGGATGAATTCAAACCAGAAGACGAGCTGAAACCCGATCCCAGCGATCGTCGTACTGGTCGTTCTCGTCAATCTTCTGA ACGTTCTGAGCGTACTGAACGTGGCGAACCGCAGATCAATTTTGATGATATTGAACTTGATGACACTGACGATCGCCGTC CGACTCGTGCGCAAAAAGCGCGTAATGAGGAACCGGAAATCGAAGAAGAAATTGACGAATCCGAAGATGAAACCGTGGAT GAAGAGCGCGTAGAGCGTCGTCCGCGTAAGCGCAAAAAAGCAGCCAGTAAACCCGCTTCTCGTCAGTATATGATGATGGG TGTCGGCATTCTGGTTCTACTGCTGTTGATCATCGGTATCGGTTCTGCGCTAAAAGCCCCCTCGACCTCTTCCAGCGATC AAACCGCGTCTGGCGAGAAGAGTATTGATCTTGCAGGCAATACGACCGATCAGGCCAATGGCGTGCAGCCAGCGCCGGGA ACCACGTCTGCGGAAAATACTCAGCAGGATGTTTCTCTGCCGCCGATCTCTTCTACGCCGACTCAAGGGCAAACCCCGGT GGCAACGGATGGTCAACAACGTGTTGAAGTGCAGGGTGACCTGAACAATGCGCTGACCCAGCCACAAAATCAGCAACAGT TGAACAATGTGGCGGTCAATTCTACATTGCCGACTGAACCCGCAACGGTTGCGCCTGTTCGCAATGGCAATGCATCGCGT GACACGGCGAAAACGCAAACCGCTGAACGTCCGGCCACTACGCGCCCGGCTCGTCAGCAGGCGGTGATTGAACCGAAAAA ACCGCAAGCAACCGTGAAAACGGAACCGAAGCCAGTCGCACAGACGCCGAAGCGAACTGAACCAGCTGCCCCTGTGGCGA GCACAAAGGCACCGGCTGCGACTTCTACGCCAGCACCAAAAGAGACGGCGACTACGGCTCCAGTACAGACGGCATCCCCG GCGCAAACCACGGCAACACCAGCCGCTGGAGGGAAGACCGCAGGTAATGTTGGTTCGTTGAAATCGGCACCGTCCAGCCA TTACACTCTGCAGCTGAGCAGTTCCTCTAACTACGACAACCTGAACGGTTGGGCGAAGAAAGAGAATCTGAAAAACTACG TTGTCTATGAAACGACGCGTAATGGTCAGCCGTGGTATGTCCTGGTTTCTGGCGTGTATGCTTCGAAAGAAGAGGCGAAA AAAGCGGTATCTACATTGCCAGCAGATGTCCAGGCCAAAAACCCGTGGGCGAAACCGCTGCGTCAGGTACAGGCCGATCT GAAGTAA
Upstream 100 bases:
>100_bases TCAGCGTAACAACAAGAAAGGTCAGGCCGCTTATCAAGCGGTCTATTAGCTTCAGGTTAATTGCAACGTGGTAAGCATTA ACCTTTTAGTGGGGTGTTAA
Downstream 100 bases:
>100_bases TCAAGGTTATCTCCCGCAATGGTTTATCATTGCGGGCGTTGCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCC GGAGAAGGTGTAATTAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKARNEEPEIEEEIDESEDETVD EERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGEKSIDLAGNTTDQANGVQPAPG TTSAENTQQDVSLPPISSTPTQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASR DTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASP AQTTATPAAGGKTAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAK KAVSTLPADVQAKNPWAKPLRQVQADLK
Sequences:
>Translated_428_residues MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKARNEEPEIEEEIDESEDETVD EERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGEKSIDLAGNTTDQANGVQPAPG TTSAENTQQDVSLPPISSTPTQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASR DTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASP AQTTATPAAGGKTAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAK KAVSTLPADVQAKNPWAKPLRQVQADLK >Mature_428_residues MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKARNEEPEIEEEIDESEDETVD EERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGEKSIDLAGNTTDQANGVQPAPG TTSAENTQQDVSLPPISSTPTQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASR DTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASP AQTTATPAAGGKTAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAK KAVSTLPADVQAKNPWAKPLRQVQADLK
Specific function: Directly or indirectly interferes with cell division [H]
COG id: COG3266
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789790, Length=428, Percent_Identity=98.8317757009346, Blast_Score=846, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007730 [H]
Pfam domain/function: PF05036 SPOR [H]
EC number: NA
Molecular weight: Translated: 46090; Mature: 46090
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKA CCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHH RNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGI CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC GSALKAPSTSSSDQTASGEKSIDLAGNTTDQANGVQPAPGTTSAENTQQDVSLPPISSTP CHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASR CCCCCCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHEEECCCCCCCCCEEEEECCCCCCC DTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAA HHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSSHYTLQLSSSSNYDN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC LNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPL CCCHHHHHCCCCEEEEEECCCCCCEEEEEECCHHCHHHHHHHHHHCCCCCCCCCHHHHHH RQVQADLK HHHHHCCC >Mature Secondary Structure MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKA CCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHH RNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGI CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC GSALKAPSTSSSDQTASGEKSIDLAGNTTDQANGVQPAPGTTSAENTQQDVSLPPISSTP CHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASR CCCCCCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHEEECCCCCCCCCEEEEECCCCCCC DTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAA HHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSSHYTLQLSSSSNYDN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC LNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPL CCCHHHHHCCCCEEEEEECCCCCCEEEEEECCHHCHHHHHHHHHHCCCCCCCCCHHHHHH RQVQADLK HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]