Click here to switch to the map view.

The map label for this gene is yheV

Identifier: 218691630

GI number: 218691630

Start: 3916012

End: 3916212

Strand: Reverse

Name: yheV

Synonym: ECED1_4011

Alternate gene names: 218691630

Gene position: 3916212-3916012 (Counterclockwise)

Preceding gene: 218691631

Following gene: 218691629

Centisome position: 75.17

GC content: 48.26

Gene sequence:

>201_bases
ATGGCAATCCGAAAACGTTTTATTGCGGGCGCAAAATGCCCGGCCTGTCAGGCACAGGATTCAATGGCGATGTGGCGCGA
AAATAATATTGATATCGTAGAATGTGTTAAGTGTGGACATCAGATGCGAGAAGCAGACAAAGAAGCCCGCGATCACGTCC
GCAAAGATGAGCAAGTGATCGGGATTTTTCATCCGGACTAG

Upstream 100 bases:

>100_bases
CAGGGAAGCCCGACGTGAACTGGAAGAGATTTTCCAGCGTGAAATGCAACAAGAACGACGCCAGCTGGACGGCTGGGATG
AATTTGAGTAGAGGGTAAAG

Downstream 100 bases:

>100_bases
CGATATGCGCCGAGTTTTTTTAAGCTAGTGAGTACACGGCTGCAGAATTCCGCTACAATCTGCGCCACTATTCTTCCCAT
GCTCAGGAGATATCATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMREADKEARDHVRKDEQVIGIFHPD

Sequences:

>Translated_66_residues
MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMREADKEARDHVRKDEQVIGIFHPD
>Mature_65_residues
AIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMREADKEARDHVRKDEQVIGIFHPD

Specific function: Unknown

COG id: COG3529

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082247, Length=66, Percent_Identity=100, Blast_Score=137, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHEV_ECO57 (P0ADX0)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   E85999
- RefSeq:   NP_289897.1
- EnsemblBacteria:   EBESCT00000025330
- EnsemblBacteria:   EBESCT00000060411
- GeneID:   961297
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4708
- GeneTree:   EBGT00050000010717
- HOGENOM:   HBG645066
- OMA:   ECVECDY
- ProtClustDB:   CLSK880638
- InterPro:   IPR012658
- TIGRFAMs:   TIGR02443

Pfam domain/function: PF09526 DUF2387

EC number: NA

Molecular weight: Translated: 7599; Mature: 7468

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
12.1 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
10.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMREADKEARDHVRKDEQVI
CCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
GIFHPD
EEECCC
>Mature Secondary Structure 
AIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMREADKEARDHVRKDEQVI
CCCHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
GIFHPD
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796