Click here to switch to the map view.

The map label for this gene is yheO

Identifier: 218691626

GI number: 218691626

Start: 3913138

End: 3913860

Strand: Reverse

Name: yheO

Synonym: ECED1_4007

Alternate gene names: 218691626

Gene position: 3913860-3913138 (Counterclockwise)

Preceding gene: 218691627

Following gene: 218691625

Centisome position: 75.13

GC content: 47.03

Gene sequence:

>723_bases
ATGTCCAGGTCGCTTTTAACCAACGAAACCAGTGAGTTGGATTTACTGGATCAACGTCCTTTTGACCAGACCGATTTTGA
TATTCTGAAATCCTACGAAGCGGTGGTGGACGGGTTAGCGATGCTTATTGGCTCCCACTGTGAAATCGTTTTGCACTCTT
TGCAGGATCTAAAATGTTCAGCCATTCGCATTGCTAACGGTGAACATACAGGCCGGAAGATTGGTTCGCCAATTACTGAC
CTGGCGCTACGTATGCTGCACGATATGACGGGAGCGGATAGCAGCGTTTCTAAATGCTACTTTACTCGCGCCAAAAGCGG
CGTATTAATGAAGTCCCTGACTATCGCGATTCGTAACCGCGAACAGCGTGTAATTGGTCTGCTGTGCATCAATATGAATC
TTGATGTTCCCTTCTCGCAGATTATGAGCACTTTTGTGCCGCCGGAAACTCCGGATGTCGGTTCAAGCGTCAACTTTGCC
TCTTCTGTTGAAGATCTGGTTACCCAAACGCTGGAGTTCACCATCGAAGAAGTGAATGCCGATCGCAATGTTTCTAATAA
CGCCAAAAATCGTCAGATCGTGCTAAATCTCTACGAGAAAGGGATCTTCGATATTAAAGACGCGATCAACCAGGTTGCTG
ACCGCCTGAACATCTCCAAACACACTGTCTATCTCTACATCCGCCAGTTCAAGAGCGGTGATTTCCAGGGGCAAGATAAG
TAA

Upstream 100 bases:

>100_bases
GAAAGCGGAACCTCCGCTGTATTAATTTAGTTACCCGCATCATTAATGAGCCTGCCCTGAAAAGTTAACGACAGGCTCCT
GAAAAGGAGTGTTTTTTTTC

Downstream 100 bases:

>100_bases
TGCGTTTTGCCATCGTGGTGACCGGGCCAGCATACGGTACGCAACAGGCGAGTAGTGCTTTTCAGTTTGCGCAGGCGCTG
ATAGCAGAAGGCCATGAGTT

Product: putative DNA-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITD
LALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFA
SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK

Sequences:

>Translated_240_residues
MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITD
LALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFA
SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK
>Mature_239_residues
SRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDL
ALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFAS
SVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK

Specific function: Unknown

COG id: COG2964

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0575

Homologues:

Organism=Escherichia coli, GI87082246, Length=240, Percent_Identity=100, Blast_Score=495, Evalue=1e-141,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): YHEO_ECOL6 (P64625)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_755984.1
- ProteinModelPortal:   P64625
- EnsemblBacteria:   EBESCT00000043952
- GeneID:   1036314
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c4120
- GeneTree:   EBGT00050000011213
- HOGENOM:   HBG640789
- OMA:   EDLKCSA
- ProtClustDB:   CLSK870458
- InterPro:   IPR013559
- ProDom:   PD037769

Pfam domain/function: PF08348 PAS_6

EC number: NA

Molecular weight: Translated: 26821; Mature: 26690

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCS
CCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
AIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNR
EEEECCCCCCCHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC
EQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFASSVEDLVTQTLEFTIEEVNA
CCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
DRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK
CCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCS
CCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
AIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNR
EEEECCCCCCCHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC
EQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFASSVEDLVTQTLEFTIEEVNA
CCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
DRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK
CCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157