| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218690769
Identifier: 218690769
GI number: 218690769
Start: 3040358
End: 3041167
Strand: Reverse
Name: 218690769
Synonym: ECED1_3093
Alternate gene names: NA
Gene position: 3041167-3040358 (Counterclockwise)
Preceding gene: 218690770
Following gene: 218690768
Centisome position: 58.38
GC content: 38.89
Gene sequence:
>810_bases ATGAGTACTAACAGCGAACGTATGTCCAATGCGCCCGTTTACTATGCATTGGTACAGGTAAAGTTTACTCCAATAGCTGC AATGAGTAAGTATGTTCCAGACATACAAGATGCGCTAAGAGTTGAGGGATTTCCTTTATTTGAGGTTTCCAATACAACTC AGTTGAAATTTGAAATAAAAAACCCCAATGAGCCACCGGTACATTCATTTGAGCCTGTGACAAGTTGGTTGATGATTGAT GCAGATAGAAGATCTGGTTTTGTTTTAGGCAACGATTTCATTACGTTCCATACAACATATTATGATAACCATGTATCTTT CATCTCGTCATTGATACTTGGTCTGAGCAAAGTTCTAGAATTTGCTAAGCCATCGCTGTTAAGTCGGATTGGGCTTCGAT ATTTGGATGCTGTGTTTCCTGAGAAAAGCGAAACAATTGAGCAGTATCTTGTAAAGGAACTTCATGGTGTTGATTTCGGA TGGACGCCAATACAGTCTATACAAGAGTCCGTATATCAGACATGTGTTGAGCCATTGATCCCTAATGGATTTATGGTTTC ACGAATACATAAGATGAATGGTCAGCTAGGTTTTCCGCCAGATATGATTCCTAATGGTTTACTGCCGTTGCCGAGATTTA GTAACACAGAGCATCGTATGCACGCAATAATTGATACAGATCATTATGTTGAAGGCAACATGTCAACTGATTTGCAGTTA ATTGAAAAACAGATTCTTTCGTTGCATAGTAAAGTTAAAGAAGCATTTGAAGGCATGGTTTCAGATTTTGCCCGTACTAA ATGGCACTGA
Upstream 100 bases:
>100_bases GTCATAGTGAACTTAATGATGGAGAAAGTGTCAACCTATGTGTAAACTACAGTTAGTAAGATAAAGAGATATGAGATGAA ACAATTTCAAGGAGGGCGGC
Downstream 100 bases:
>100_bases AACAACGGAGGTGACTAAAATGTATGCAATTCCCACCGGAAGCATAGGCTCTGTAGATCGATATTCTCCAAATTTGCAGT CAAGCTCATGTGTATCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSTNSERMSNAPVYYALVQVKFTPIAAMSKYVPDIQDALRVEGFPLFEVSNTTQLKFEIKNPNEPPVHSFEPVTSWLMID ADRRSGFVLGNDFITFHTTYYDNHVSFISSLILGLSKVLEFAKPSLLSRIGLRYLDAVFPEKSETIEQYLVKELHGVDFG WTPIQSIQESVYQTCVEPLIPNGFMVSRIHKMNGQLGFPPDMIPNGLLPLPRFSNTEHRMHAIIDTDHYVEGNMSTDLQL IEKQILSLHSKVKEAFEGMVSDFARTKWH
Sequences:
>Translated_269_residues MSTNSERMSNAPVYYALVQVKFTPIAAMSKYVPDIQDALRVEGFPLFEVSNTTQLKFEIKNPNEPPVHSFEPVTSWLMID ADRRSGFVLGNDFITFHTTYYDNHVSFISSLILGLSKVLEFAKPSLLSRIGLRYLDAVFPEKSETIEQYLVKELHGVDFG WTPIQSIQESVYQTCVEPLIPNGFMVSRIHKMNGQLGFPPDMIPNGLLPLPRFSNTEHRMHAIIDTDHYVEGNMSTDLQL IEKQILSLHSKVKEAFEGMVSDFARTKWH >Mature_268_residues STNSERMSNAPVYYALVQVKFTPIAAMSKYVPDIQDALRVEGFPLFEVSNTTQLKFEIKNPNEPPVHSFEPVTSWLMIDA DRRSGFVLGNDFITFHTTYYDNHVSFISSLILGLSKVLEFAKPSLLSRIGLRYLDAVFPEKSETIEQYLVKELHGVDFGW TPIQSIQESVYQTCVEPLIPNGFMVSRIHKMNGQLGFPPDMIPNGLLPLPRFSNTEHRMHAIIDTDHYVEGNMSTDLQLI EKQILSLHSKVKEAFEGMVSDFARTKWH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30673; Mature: 30541
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNSERMSNAPVYYALVQVKFTPIAAMSKYVPDIQDALRVEGFPLFEVSNTTQLKFEIK CCCCCCHHCCCCEEEEEEEEECCHHHHHHHHCCCHHHHHHCCCCCEEEECCCEEEEEEEC NPNEPPVHSFEPVTSWLMIDADRRSGFVLGNDFITFHTTYYDNHVSFISSLILGLSKVLE CCCCCCCCCCCHHHHEEEEECCCCCCEEEECCEEEEEEEEECHHHHHHHHHHHHHHHHHH FAKPSLLSRIGLRYLDAVFPEKSETIEQYLVKELHGVDFGWTPIQSIQESVYQTCVEPLI HHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC PNGFMVSRIHKMNGQLGFPPDMIPNGLLPLPRFSNTEHRMHAIIDTDHYVEGNMSTDLQL CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCEECCCCCHHHHH IEKQILSLHSKVKEAFEGMVSDFARTKWH HHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STNSERMSNAPVYYALVQVKFTPIAAMSKYVPDIQDALRVEGFPLFEVSNTTQLKFEIK CCCCCHHCCCCEEEEEEEEECCHHHHHHHHCCCHHHHHHCCCCCEEEECCCEEEEEEEC NPNEPPVHSFEPVTSWLMIDADRRSGFVLGNDFITFHTTYYDNHVSFISSLILGLSKVLE CCCCCCCCCCCHHHHEEEEECCCCCCEEEECCEEEEEEEEECHHHHHHHHHHHHHHHHHH FAKPSLLSRIGLRYLDAVFPEKSETIEQYLVKELHGVDFGWTPIQSIQESVYQTCVEPLI HHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC PNGFMVSRIHKMNGQLGFPPDMIPNGLLPLPRFSNTEHRMHAIIDTDHYVEGNMSTDLQL CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCEECCCCCHHHHH IEKQILSLHSKVKEAFEGMVSDFARTKWH HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA