| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
Click here to switch to the map view.
The map label for this gene is R
Identifier: 218690754
GI number: 218690754
Start: 3030469
End: 3030921
Strand: Reverse
Name: R
Synonym: ECED1_3078
Alternate gene names: NA
Gene position: 3030921-3030469 (Counterclockwise)
Preceding gene: 218690755
Following gene: 218690753
Centisome position: 58.18
GC content: 53.64
Gene sequence:
>453_bases TTGCGTGTCAGGAGCGAAACAGTGAACAAACCACAATCCCTGCGCCACGCCCTCAATAAAGCGGTGCCTTATGTCCGCAA TAACCCGGACAAACTGCATCTGTTTGTGGATAACGGTTCGCTGGTTGCCACGGGGGCCAGCTCCATGTCGTGGGAGTACC GTTACACCCTGAATGCGGTGATTGAGGATTTCAGCGGCGACCAGAATCTGCTGATGGCCCCGGTTTTGCTGTGGCTGAGG GATAACCAGCCCGATGCCATCAATAACCCGGCGTTACGGGAAAAACTATTCACCTTTGAGGTGGATATTCTGCGCAACGA TGTCTGTGATATCAGCCTGAACCTGCAACTGACGGAGCGTGTGCTGGTCAGCACTGACGGTAGTGTGTCGAGCGTTGAAG CTATAGCGGAACCTGATGAACCTGAAGAAATGTGGACGGTGAAACGTGGCTGA
Upstream 100 bases:
>100_bases CTGGATCAGGCAGCGCCGCGCACTAACGGTGATCTGAATGCGTTGCTGGATGAAACGGAGGCCGCCTGGGCGGTCTGTGC AGACAAAGTGGATATGATTA
Downstream 100 bases:
>100_bases ACTGCAGAAAGTGGACGACTGGCTGAGTGCCTTGCTGGCGAATCTGGAACCAGCCGCCAGAAGCCGCATGATGCGCCAGC TGGCGCAGGAACTGCGCCGG
Product: tail completion protein R (GpR)
Products: NA
Alternate protein names: Tail Completion Protein R; P2 Phage Tail Completion Protein R; Phage Tail Completion Protein R; Phage Tail Protein; Bacteriophage P2 Tail Completion Protein GPR; Phage-Related Tail Completion Protein; Bacteriophage Tail Completion Protein R; Tail Completion Protein; Bacteriophage Tail Completion Protein GpR-Like Protein; Phage-Related Tail Protein; P2 Phage Tail Completion Protein R GpR; Prophage Tail Completion Protein; Phage Tail Protein Fragment; Phage Tail Completion Protein GpR; Phage Tail Completion R Family Protein; Bacteriophage P2 Tail Completion Protein GpR; Tail Completion-Like Protein; Bacteriophage Tail Completion-Like Protein
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MRVRSETVNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVATGASSMSWEYRYTLNAVIEDFSGDQNLLMAPVLLWLR DNQPDAINNPALREKLFTFEVDILRNDVCDISLNLQLTERVLVSTDGSVSSVEAIAEPDEPEEMWTVKRG
Sequences:
>Translated_150_residues MRVRSETVNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVATGASSMSWEYRYTLNAVIEDFSGDQNLLMAPVLLWLR DNQPDAINNPALREKLFTFEVDILRNDVCDISLNLQLTERVLVSTDGSVSSVEAIAEPDEPEEMWTVKRG >Mature_150_residues MRVRSETVNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVATGASSMSWEYRYTLNAVIEDFSGDQNLLMAPVLLWLR DNQPDAINNPALREKLFTFEVDILRNDVCDISLNLQLTERVLVSTDGSVSSVEAIAEPDEPEEMWTVKRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16943; Mature: 16943
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRSETVNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVATGASSMSWEYRYTLNAV CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCCCCEEEEEEHHHH IEDFSGDQNLLMAPVLLWLRDNQPDAINNPALREKLFTFEVDILRNDVCDISLNLQLTER HHHCCCCCCHHHHHEEEEEECCCCCCCCCHHHHHHHHEEEEEEHHCCCEEEEEEEEEEEE VLVSTDGSVSSVEAIAEPDEPEEMWTVKRG EEEECCCCHHHHHHHCCCCCCHHHEEECCC >Mature Secondary Structure MRVRSETVNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVATGASSMSWEYRYTLNAV CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCCCCEEEEEEHHHH IEDFSGDQNLLMAPVLLWLRDNQPDAINNPALREKLFTFEVDILRNDVCDISLNLQLTER HHHCCCCCCHHHHHEEEEEECCCCCCCCCHHHHHHHHEEEEEEHHCCCEEEEEEEEEEEE VLVSTDGSVSSVEAIAEPDEPEEMWTVKRG EEEECCCCHHHHHHHCCCCCCHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA