| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218690628
Identifier: 218690628
GI number: 218690628
Start: 2895001
End: 2895978
Strand: Reverse
Name: 218690628
Synonym: ECED1_2939
Alternate gene names: NA
Gene position: 2895978-2895001 (Counterclockwise)
Preceding gene: 218690629
Following gene: 218690627
Centisome position: 55.59
GC content: 52.45
Gene sequence:
>978_bases ATGAAGCAGGATAAAAGACGCGGTCTGACCCGGATCGCATTAGCGCTGGCACTGGCAGGTTATTGTGTGGCACCTGTGGC GCTGGCTGAAGACAGTGCCTGGGTCGACAGCGGCGAAACCAATATTTTCCAGGGGACCATTCCGTGGCTCTATTCGGAAG GGGGAAGTGCTACGACAGATGCCGACCGTGTAACGTTGACTTCTGATCTAAAAGGCGCTCGCCCGCAAGGCAGTGAAACG GACAAGCGTCTTTACTCGGGTGATAAATTAACCGTAAGTTGGGAAATTGGTGATACCGAAGGCGACGTGGATCTTGGAGG ATTGGGCGATAACGCGAAAACTATCGATACTATCCGCTGGATGAGCTACAAGGATGCGCAGGGGGGGGATCCAAAAGAGC TGGCAACGAAGGTGACCAGTTACACTCTTACCGATGCCGACCGTGGTCGCTATATCGGTATTGAAATTACGCCAACCACG CAGACCGGTACGCCAAACGTCGGGACTGCGCTGCATCTTTATGACGTTTCTACTGCCAGCGGCGGCGGAAGCGACAGCGA TAACGTTGCACCGGGGCCGGTGGTTAACCAGAACCTGAAAGTCGCCATCTTTGTTGATGGTACCAGTATCAACCTTATCA ACGGTAGCACGCCAATCGAACTTGGCAAAACCTACGTGGCCAAACTGTACTCGGATGAGAACAAAAATGGCAAGTTTGAT GCGGGTACCGATGCTGACGTCACCGCCAATTATGACTTCCGTTGGGTACTTTCTGGCAGCAGCCAACAGCTTGGCACTTC GGGTGGCATCGTTAACTCAAGCTTCGATAATAACAATTTGGTCATCCCTGCGACCAACGACGAAGCCAGAACCAACCTTA ACGGCCCTGCGCGCGATGGAAAAGAGGCACTTTCCATCCCGACCAACGGCGACGGGGTACAGGGTTACAAACTTCACATT ATTTACAAACACAAATAA
Upstream 100 bases:
>100_bases TGGCTTGCAGGGGTACGGTTTACGCGTGCTGTATACCAAAAAATAAGATTGGCGTAAGGCCAGTCGGCCAGTCGCTGAAG GTTCATTAAGGAGAGCATCA
Downstream 100 bases:
>100_bases CGCGTACTCGACAAGCGTCCGTTTAACAACCGGTGGAGTTTCTGTCATGTCCCTGACCCTGAATAAAATCCTTGTGTTAT GCGCATTGCTGATAAGCGCA
Product: putative outer membrane protein (sivI-like)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKQDKRRGLTRIALALALAGYCVAPVALAEDSAWVDSGETNIFQGTIPWLYSEGGSATTDADRVTLTSDLKGARPQGSET DKRLYSGDKLTVSWEIGDTEGDVDLGGLGDNAKTIDTIRWMSYKDAQGGDPKELATKVTSYTLTDADRGRYIGIEITPTT QTGTPNVGTALHLYDVSTASGGGSDSDNVAPGPVVNQNLKVAIFVDGTSINLINGSTPIELGKTYVAKLYSDENKNGKFD AGTDADVTANYDFRWVLSGSSQQLGTSGGIVNSSFDNNNLVIPATNDEARTNLNGPARDGKEALSIPTNGDGVQGYKLHI IYKHK
Sequences:
>Translated_325_residues MKQDKRRGLTRIALALALAGYCVAPVALAEDSAWVDSGETNIFQGTIPWLYSEGGSATTDADRVTLTSDLKGARPQGSET DKRLYSGDKLTVSWEIGDTEGDVDLGGLGDNAKTIDTIRWMSYKDAQGGDPKELATKVTSYTLTDADRGRYIGIEITPTT QTGTPNVGTALHLYDVSTASGGGSDSDNVAPGPVVNQNLKVAIFVDGTSINLINGSTPIELGKTYVAKLYSDENKNGKFD AGTDADVTANYDFRWVLSGSSQQLGTSGGIVNSSFDNNNLVIPATNDEARTNLNGPARDGKEALSIPTNGDGVQGYKLHI IYKHK >Mature_325_residues MKQDKRRGLTRIALALALAGYCVAPVALAEDSAWVDSGETNIFQGTIPWLYSEGGSATTDADRVTLTSDLKGARPQGSET DKRLYSGDKLTVSWEIGDTEGDVDLGGLGDNAKTIDTIRWMSYKDAQGGDPKELATKVTSYTLTDADRGRYIGIEITPTT QTGTPNVGTALHLYDVSTASGGGSDSDNVAPGPVVNQNLKVAIFVDGTSINLINGSTPIELGKTYVAKLYSDENKNGKFD AGTDADVTANYDFRWVLSGSSQQLGTSGGIVNSSFDNNNLVIPATNDEARTNLNGPARDGKEALSIPTNGDGVQGYKLHI IYKHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34464; Mature: 34464
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQDKRRGLTRIALALALAGYCVAPVALAEDSAWVDSGETNIFQGTIPWLYSEGGSATTD CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCEEEECCCCCCCC ADRVTLTSDLKGARPQGSETDKRLYSGDKLTVSWEIGDTEGDVDLGGLGDNAKTIDTIRW CCEEEEECCCCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCEEECCCCCCCCEEEEEEE MSYKDAQGGDPKELATKVTSYTLTDADRGRYIGIEITPTTQTGTPNVGTALHLYDVSTAS EEECCCCCCCHHHHHHHHHEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECC GGGSDSDNVAPGPVVNQNLKVAIFVDGTSINLINGSTPIELGKTYVAKLYSDENKNGKFD CCCCCCCCCCCCCEECCCEEEEEEECCCEEEEECCCCCHHHHHHEEEEECCCCCCCCCCC AGTDADVTANYDFRWVLSGSSQQLGTSGGIVNSSFDNNNLVIPATNDEARTNLNGPARDG CCCCCCEEECCEEEEEECCCCCCCCCCCCEEECCCCCCCEEEECCCCHHHCCCCCCCCCC KEALSIPTNGDGVQGYKLHIIYKHK CCEEECCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MKQDKRRGLTRIALALALAGYCVAPVALAEDSAWVDSGETNIFQGTIPWLYSEGGSATTD CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCEEEECCCCCCCC ADRVTLTSDLKGARPQGSETDKRLYSGDKLTVSWEIGDTEGDVDLGGLGDNAKTIDTIRW CCEEEEECCCCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCEEECCCCCCCCEEEEEEE MSYKDAQGGDPKELATKVTSYTLTDADRGRYIGIEITPTTQTGTPNVGTALHLYDVSTAS EEECCCCCCCHHHHHHHHHEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECC GGGSDSDNVAPGPVVNQNLKVAIFVDGTSINLINGSTPIELGKTYVAKLYSDENKNGKFD CCCCCCCCCCCCCEECCCEEEEEEECCCEEEEECCCCCHHHHHHEEEEECCCCCCCCCCC AGTDADVTANYDFRWVLSGSSQQLGTSGGIVNSSFDNNNLVIPATNDEARTNLNGPARDG CCCCCCEEECCEEEEEECCCCCCCCCCCCEEECCCCCCCEEEECCCCHHHCCCCCCCCCC KEALSIPTNGDGVQGYKLHIIYKHK CCEEECCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA