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The map label for this gene is yfeN [H]

Identifier: 218690545

GI number: 218690545

Start: 2799516

End: 2800280

Strand: Direct

Name: yfeN [H]

Synonym: ECED1_2851

Alternate gene names: 218690545

Gene position: 2799516-2800280 (Clockwise)

Preceding gene: 218690540

Following gene: 218690547

Centisome position: 53.74

GC content: 44.84

Gene sequence:

>765_bases
ATGAAAAAACATCTTTTTACTCTGACACTCTCTTCTGTATTGGCGATACCAGCAGTATCCCATGCAGAATTTAAAGGCGG
TTTTGCTGATATAGGTATTCATTATCTTGACTGGACTAGCAGAACCACTGAGAAATCGTCGACCAAATCACACAAAGATG
ATTTTGGATATCTGGAACTGGAAGGCGGCGCTAACTTTAGTTGGGGAGAAATGTACGGGTTCTTCGACTGGGAAAACTTT
TATAATGATCGTCATGATAAACCGGGTAGCGAGCAGCGTTATACATTTAAAAATACCAACCGTATTTACCTGGGTGACAC
CGGATTTAATCTCTACTTGCATGCGTATGGCACCTACGGTTCTGCGAATCGTGTGAATTTCCATGACGATATGTTCCTTT
ACGGGATCGGCTACAATTTCACCGGCAGCGGTTGGTGGTTCAAACCGTTCTTTGCAAAACGCTATACAGACCAAACCTAT
TATACCGGCGATAACGGTTATGTCGCCGGTTGGGTTGCAGGTTACAGCTTTATGCTGGGCAGTGAGAAATTCACCCTCAC
CAACTGGAACGAGTACGAGTTTGATCGTGATGCCACCTACGCGGCAGGTAATGGCGGCAAAGAAGGTCTGAACGGTGCCG
TCGCACTTTGGTGGAATGCAACTTCACACATCACCACAGGGATTCAGTATCGTTATGCGGATGACAAACTGGGCGAAGAT
TTTTACCAGGATGCGATAATCTACTCCATCAAATTTAATTTCTGA

Upstream 100 bases:

>100_bases
TATTGGTACTCTTCTTTCCCTTGCATTAACAATATGCCGCTTTTAATCAACCTTTTTATTAAGCAATCAACTAATAACGA
TCGGCATAGGGAATTATGCT

Downstream 100 bases:

>100_bases
TTGATTACTGCCGGAGCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAG
CGCATTGCCCTGGTCTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKKHLFTLTLSSVLAIPAVSHAEFKGGFADIGIHYLDWTSRTTEKSSTKSHKDDFGYLELEGGANFSWGEMYGFFDWENF
YNDRHDKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYGSANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTY
YTGDNGYVAGWVAGYSFMLGSEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGED
FYQDAIIYSIKFNF

Sequences:

>Translated_254_residues
MKKHLFTLTLSSVLAIPAVSHAEFKGGFADIGIHYLDWTSRTTEKSSTKSHKDDFGYLELEGGANFSWGEMYGFFDWENF
YNDRHDKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYGSANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTY
YTGDNGYVAGWVAGYSFMLGSEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGED
FYQDAIIYSIKFNF
>Mature_254_residues
MKKHLFTLTLSSVLAIPAVSHAEFKGGFADIGIHYLDWTSRTTEKSSTKSHKDDFGYLELEGGANFSWGEMYGFFDWENF
YNDRHDKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYGSANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTY
YTGDNGYVAGWVAGYSFMLGSEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGED
FYQDAIIYSIKFNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.parahaemolyticus ompK [H]

Homologues:

Organism=Escherichia coli, GI1788747, Length=254, Percent_Identity=96.8503937007874, Blast_Score=485, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 29237; Mature: 29237

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHLFTLTLSSVLAIPAVSHAEFKGGFADIGIHYLDWTSRTTEKSSTKSHKDDFGYLEL
CCCEEEEEEHHHHHHCCCCCCHHCCCCEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEE
EGGANFSWGEMYGFFDWENFYNDRHDKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYG
CCCCCCCHHHEEEEECHHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEEEECCC
SANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTYYTGDNGYVAGWVAGYSFMLG
CCCEEEECCCEEEEEECCCCCCCCCEECCHHHHHCCCCEEEECCCCEEEEEECCEEEEEC
SEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGED
CCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEECEEEEECCCHHCHH
FYQDAIIYSIKFNF
HHCCEEEEEEEECC
>Mature Secondary Structure
MKKHLFTLTLSSVLAIPAVSHAEFKGGFADIGIHYLDWTSRTTEKSSTKSHKDDFGYLEL
CCCEEEEEEHHHHHHCCCCCCHHCCCCEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEE
EGGANFSWGEMYGFFDWENFYNDRHDKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYG
CCCCCCCHHHEEEEECHHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEEEECCC
SANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTYYTGDNGYVAGWVAGYSFMLG
CCCEEEECCCEEEEEECCCCCCCCCEECCHHHHHCCCCEEEECCCCEEEEEECCEEEEEC
SEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGED
CCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEECEEEEECCCHHCHH
FYQDAIIYSIKFNF
HHCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559336; 9205837; 9278503 [H]